Gene Information

Name : dksA (Pecwa_1164)
Accession : YP_003258585.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : RNA polymerase-binding transcription factor
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG1734
EC number : -
Position : 1255464 - 1255919 bp
Length : 456 bp
Strand : -
Note : TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: eca:ECA3317 DnaK transcriptional regulator DksA

DNA sequence :
ATGCAAGAAGGGCAAAATCGTAAGACATCTTCTCTGAGCATTCTCGCAATTGCCGGAGTAGAGCCGTACCAAGAGAAGCC
GGGCGAAGAGTATATGAACGACGCTCAGTTGGCTCATTTCAAGCGTATTCTTGAAGCATGGCGCAACCAACTCATGGATG
AGGTGGATCGGACCGTATCGCACATGCGCGATGAAGCCGCCAATTTTCCCGATCCCGTGGATCGCGCGGCGCAGGAAGAA
GAGTTCAGTCTCGAACTGCGTAACCGTGACCGTGAGCGTAAGCTGATCAAGAAAATCGCCAAAACCCTGGTGAAAATCGA
AGATGAGGATTTCGGATTCTGTGAATCCTGTGGCGTCGAGATTGGCATCCGCCGTCTGGAAGCTCGTCCGACTGCCGATC
TGTGTATCGACTGCAAAACGCTGGCAGAAATACGCGAAAAGCAAATGGCAGGATAA

Protein sequence :
MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNDAQLAHFKRILEAWRNQLMDEVDRTVSHMRDEAANFPDPVDRAAQEE
EFSLELRNRDRERKLIKKIAKTLVKIEDEDFGFCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00314 YP_008207779.1 DnaK suppressor protein Not tested AbaR25 Protein 1e-45 66
BJAB0868_00318 YP_008211644.1 DnaK suppressor protein Not tested AbaR26 Protein 1e-45 66