Gene Information

Name : Pecwa_1083 (Pecwa_1083)
Accession : YP_003258504.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3523
EC number : -
Position : 1173051 - 1176548 bp
Length : 3498 bp
Strand : +
Note : TIGRFAM: type VI hypothetical protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: pct:PC1_3242 type VI hypothetical protein IcmF

DNA sequence :
ATGTTTAAAACAATTATAACCTTTCTACGCAAGCAGTTGCCTAAACTGAAACCCTCCTGGCTGCTTTTGGGGGCGCTACT
GTGGGTCGTGGTGTTGGTTCTGGCCTGGTGGCTGGGGCCGCGTTTGACGGTAGGCGAGTCGCGTCCGTTACAGGGGATCT
GGGGCCGCGTGGTGTTCACGCTGGTCTGGCTGTGGCTGGCGTTCTCCTATAGTGCCTGGCTGGTATGGCGGCGTGTGCAA
CTGATGCGGTCAGAGCGTCATGAGCAACAGGTGACCGAGCAGGATCCCCTACAGGTGTATGTCGACGGCCAGCAGACGTT
TCTCGATCGCTGGCTGGACGCGTTTCAGACCCAGTTGGGTAAAAAAGCGCTGTATGCGATGCCGTGGTATCTGACGATTG
GTTTGGCTGGCAGTGGTAAAAGTAGCCTGATCCACCGTGCCAACCCGGCAAATAAAATGAATCCGAAGCTGGATGCAGAG
CTGCGGGATGTGGCAGCAGGCCAGCAGGTGAGCAGTTGGGTCGGAGAATCTGCCGTCATCTGGGATCCTAGCGGGCAGCT
ACTCGCACAGCCTGAATTGGAAGGCGATGCGCTCGGGCAGCGTCATGCTCGGCTATGGCAGCACCTGCTACAGTGGCTCA
GTGAGAATCGCCGCCGCCAGCCGCTTAACGGTCTGGTTCTTACGCTGGATATCTCCTGGCTGGCACAGGCTGGTGTCGCA
GATCGCAAAGCCTACGCGCAAGTCATGCGTGCCCGTTTGCAGGAAATTTCGGTCAGCATCAATACGCGTTTACCGGTGTA
TATCGCACTGACTCGGCTGGATATGCTGAGCGGCTTCGACAAGGTCTATCGCCAGTTGAACCGCGACGCGCGTCAGGCGG
TATTAGGGGTGACGTTTACCCCACAGGCGAGCAACAGCAAAGGCTGGTTAGAAGAGCTGGAGCGTTTTTGGGATGAGTGG
GTCACGCACCTGAATGACAACCTGCCAGACATGCTGTTGACCCAATCGGACAGAAGCGTGCGCAATTCGCTGTTCTCGTT
TGTTCGCCAGTTGGCCGGGGTGAAAGACTATGTGATGGAAGTGCTGACGGAAACGTTAGCAATAGGTGAAGATCGCGCGT
TCCTGATCCGTGGCGTCTACGTCAGCTCTGTTTATCAACAAGGGGTGCCGTTTGATGCTTTTGCACAGTCGGCCTCCCGA
CGTTATCAACTGCCAGAGCCGATTAACCCCGCGTTGCGCGGTGAATCGAATACGTTTTTTGTCCAGCGCCTCTTCCCTGA
CGTCATTTTCCCTGAAGCCAGCTTGGCCGGAGAAAACCGACTGCATAGCCTCTATCGTCGGCGTCGGTTGAGTATTGGTG
TGGGCTGCATGCTGCTCGCCGGTTTGGTGCTGGTGGGCAGTTGGCACCATTTCTATCGGGTCAATGAAGAAGCCGGGCGT
AACGTACTGACGAAAGCGCAGGCGTTTATCGGCACTAATGAACTGGAAGGCCAACCGGGCTACGGCTATCAGCAGTTGCC
GCGTCTGAATTTGATTCGTGATGCGACATTATCTTTTGGTAACTATCACGAACGCACGCCGCTGCTGGCCGATCTGGGTC
TGTATCAGGGCGATAAGATCGGGCCTTATGTCGAGGGCACCTATCTGCAAATGCTGAATCAGCGCTTTTTACCGGCGGTG
ATGCAGGGGTTGCTGGAGGATTTGAATCAGGCGCCTGCCAATAGCGAGCAAAAACTGACCATTCTGCGTGTAATGCGCAT
GCTGGACGATGCTTCTGGGCGCAATAAAGCGCTGGTCGAACAGTTTATGGCGCAACGCTGGCAAAAGGCATTTCCTGCTC
AAGGTCAGGTGCAGGAAGAACTGATGCAACATCTGGATTACGCCCTCGATCATACCAACTGGCATCAGTCCCGTGAGCAA
AAAGATGCGGTAGCGATTAGCACTTTTGCACCGTTTAATGGGCCGATTACGCTGGCTCAGCAGGAACTAAGCAAACTGCC
GATGTATCAGCGCGTTTATCAGAGTCTGGTCATGAAGGCGACTCAAGTGCTGCCGCCGGATTTAGCGATCCGTGATGAAG
TCGGGCCGACGTTTGATCCGGTGTTTTCGCTGCGTAACGACAAAGCGGGGAGTGTGCCACGACTGCTAACCTATCCCGGC
TTCAGTGATTATTACCTCAAGCAGGACAAAGCGCTGCTAGAGCTGACGGCATTGGATGCCTGGGTTCTGGGACAGCGTGA
ACGTGCACAGTTCAGCGAGGCCGATCGGCGGGAAATTCTGCGTCAGGTGAATGACCGCTACATTACGGATTACATCAACC
AGTGGCAGAAAGTGTTAGCGAACATTGATGTGCAGGCGCTCGATACGCCAGAACAGGCGCTAGATATCCTCACGGACATT
ACCGGTAACGATCAGCCCTTCCAGCGCGTGCTGACGACGGTCAGTGATAACACCCGCATTCGTAAGCTTGCCGATGATGA
TAACGACACGGCGCAGAACATCAATACGCGTACTGGTCGTCCGTTTATGACCATCAATGCGGCGCTGAGTGGACGCGGTG
AGCAGGGGCCGCTGGTGCAAGAGGTCAATCAGAAACTGACCGATCTCTATCACTATCTCGACCAGATCGTTAACGCGACC
GACCCGGGACAGGCGGCATTGAAGGCGATGCAGGCACGGCAGGGAAATAAATTTGCCGATCCGGTATTTGCCTTACAGCA
ATATGCTCGCAGCCTCCCTGCGCCGTTGGACCGCTGGGTAGGACAATTAGCCGGAGAGAGCGCCAGTCTGGTGACTGGGC
TCGCGATGTCATCGCTGAATCAGGAATGGCTGGATAAAGTCGTGACGCCATTCAACGAGAAGCTGGCGAATCGTTACCCC
TTCGATCCGTCATCCGACAAAGATGTGCCGCTATCGGAAATGGAAATGTTCTTCATGACGGGCGGGACGCTGGACAGCTT
CTATCAAACCAACCTCAAAGCGATGATGGAAAGCGGCATGCTGGAAGAAGGCATGGCGTCACCTATGCAGGCCGAGCTGA
TGAAACAGCTTGAACGCGCTAATCGTATCCGTCAGACCCTGTTTAATGCGCAGGGCAGCCTGGAAGTGCATTTCGTTCTG
GAACCGCTGGAATTAACGGCGAACAAGCGCCGCAGCGTGCTGAATCTGGATGGACAGCTACTGGAATACAGCCACGGCCG
TCGCCAGAAAACGCCGCTGGTGTGGCCAAACAGTATGCGCGACGGGGCTGAAAGCAAGTTAACACTGGTGCCGGACGATC
GTGAGCGCTCGCCGCGCAGCCTGAGCTTTAACGGGCCGTGGGCCATGTTCCGGTTAATCAATAGCGATCAACTGACGAAG
GTTAATGAGAACACCTTTGACGTGCGTTTCTCGCTGGAGAATGGGGCGATGACGTATCGCGTTTATACCGATGCCAGCCA
TAACCCGTTTGCTGGTGGTCTGTTCAGCCAATTCACGTTGTCTGACTCGCTTTATTAA

Protein sequence :
MFKTIITFLRKQLPKLKPSWLLLGALLWVVVLVLAWWLGPRLTVGESRPLQGIWGRVVFTLVWLWLAFSYSAWLVWRRVQ
LMRSERHEQQVTEQDPLQVYVDGQQTFLDRWLDAFQTQLGKKALYAMPWYLTIGLAGSGKSSLIHRANPANKMNPKLDAE
LRDVAAGQQVSSWVGESAVIWDPSGQLLAQPELEGDALGQRHARLWQHLLQWLSENRRRQPLNGLVLTLDISWLAQAGVA
DRKAYAQVMRARLQEISVSINTRLPVYIALTRLDMLSGFDKVYRQLNRDARQAVLGVTFTPQASNSKGWLEELERFWDEW
VTHLNDNLPDMLLTQSDRSVRNSLFSFVRQLAGVKDYVMEVLTETLAIGEDRAFLIRGVYVSSVYQQGVPFDAFAQSASR
RYQLPEPINPALRGESNTFFVQRLFPDVIFPEASLAGENRLHSLYRRRRLSIGVGCMLLAGLVLVGSWHHFYRVNEEAGR
NVLTKAQAFIGTNELEGQPGYGYQQLPRLNLIRDATLSFGNYHERTPLLADLGLYQGDKIGPYVEGTYLQMLNQRFLPAV
MQGLLEDLNQAPANSEQKLTILRVMRMLDDASGRNKALVEQFMAQRWQKAFPAQGQVQEELMQHLDYALDHTNWHQSREQ
KDAVAISTFAPFNGPITLAQQELSKLPMYQRVYQSLVMKATQVLPPDLAIRDEVGPTFDPVFSLRNDKAGSVPRLLTYPG
FSDYYLKQDKALLELTALDAWVLGQRERAQFSEADRREILRQVNDRYITDYINQWQKVLANIDVQALDTPEQALDILTDI
TGNDQPFQRVLTTVSDNTRIRKLADDDNDTAQNINTRTGRPFMTINAALSGRGEQGPLVQEVNQKLTDLYHYLDQIVNAT
DPGQAALKAMQARQGNKFADPVFALQQYARSLPAPLDRWVGQLAGESASLVTGLAMSSLNQEWLDKVVTPFNEKLANRYP
FDPSSDKDVPLSEMEMFFMTGGTLDSFYQTNLKAMMESGMLEEGMASPMQAELMKQLERANRIRQTLFNAQGSLEVHFVL
EPLELTANKRRSVLNLDGQLLEYSHGRRQKTPLVWPNSMRDGAESKLTLVPDDRERSPRSLSFNGPWAMFRLINSDQLTK
VNENTFDVRFSLENGAMTYRVYTDASHNPFAGGLFSQFTLSDSLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec30 AAQ96724.1 Aec30 Not tested AGI-1 Protein 0.0 45
pmt1 AAN64194.1 Pmt1 Not tested macrophage toxin pathogenicity island Protein 0.0 45
aec30 YP_851415.1 hypothetical protein Not tested PAI II APEC-O1 Protein 0.0 45