Name : Pecwa_1083 (Pecwa_1083) Accession : YP_003258504.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG3523 EC number : - Position : 1173051 - 1176548 bp Length : 3498 bp Strand : + Note : TIGRFAM: type VI hypothetical protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: pct:PC1_3242 type VI hypothetical protein IcmF DNA sequence : ATGTTTAAAACAATTATAACCTTTCTACGCAAGCAGTTGCCTAAACTGAAACCCTCCTGGCTGCTTTTGGGGGCGCTACT GTGGGTCGTGGTGTTGGTTCTGGCCTGGTGGCTGGGGCCGCGTTTGACGGTAGGCGAGTCGCGTCCGTTACAGGGGATCT GGGGCCGCGTGGTGTTCACGCTGGTCTGGCTGTGGCTGGCGTTCTCCTATAGTGCCTGGCTGGTATGGCGGCGTGTGCAA CTGATGCGGTCAGAGCGTCATGAGCAACAGGTGACCGAGCAGGATCCCCTACAGGTGTATGTCGACGGCCAGCAGACGTT TCTCGATCGCTGGCTGGACGCGTTTCAGACCCAGTTGGGTAAAAAAGCGCTGTATGCGATGCCGTGGTATCTGACGATTG GTTTGGCTGGCAGTGGTAAAAGTAGCCTGATCCACCGTGCCAACCCGGCAAATAAAATGAATCCGAAGCTGGATGCAGAG CTGCGGGATGTGGCAGCAGGCCAGCAGGTGAGCAGTTGGGTCGGAGAATCTGCCGTCATCTGGGATCCTAGCGGGCAGCT ACTCGCACAGCCTGAATTGGAAGGCGATGCGCTCGGGCAGCGTCATGCTCGGCTATGGCAGCACCTGCTACAGTGGCTCA GTGAGAATCGCCGCCGCCAGCCGCTTAACGGTCTGGTTCTTACGCTGGATATCTCCTGGCTGGCACAGGCTGGTGTCGCA GATCGCAAAGCCTACGCGCAAGTCATGCGTGCCCGTTTGCAGGAAATTTCGGTCAGCATCAATACGCGTTTACCGGTGTA TATCGCACTGACTCGGCTGGATATGCTGAGCGGCTTCGACAAGGTCTATCGCCAGTTGAACCGCGACGCGCGTCAGGCGG TATTAGGGGTGACGTTTACCCCACAGGCGAGCAACAGCAAAGGCTGGTTAGAAGAGCTGGAGCGTTTTTGGGATGAGTGG GTCACGCACCTGAATGACAACCTGCCAGACATGCTGTTGACCCAATCGGACAGAAGCGTGCGCAATTCGCTGTTCTCGTT TGTTCGCCAGTTGGCCGGGGTGAAAGACTATGTGATGGAAGTGCTGACGGAAACGTTAGCAATAGGTGAAGATCGCGCGT TCCTGATCCGTGGCGTCTACGTCAGCTCTGTTTATCAACAAGGGGTGCCGTTTGATGCTTTTGCACAGTCGGCCTCCCGA CGTTATCAACTGCCAGAGCCGATTAACCCCGCGTTGCGCGGTGAATCGAATACGTTTTTTGTCCAGCGCCTCTTCCCTGA CGTCATTTTCCCTGAAGCCAGCTTGGCCGGAGAAAACCGACTGCATAGCCTCTATCGTCGGCGTCGGTTGAGTATTGGTG TGGGCTGCATGCTGCTCGCCGGTTTGGTGCTGGTGGGCAGTTGGCACCATTTCTATCGGGTCAATGAAGAAGCCGGGCGT AACGTACTGACGAAAGCGCAGGCGTTTATCGGCACTAATGAACTGGAAGGCCAACCGGGCTACGGCTATCAGCAGTTGCC GCGTCTGAATTTGATTCGTGATGCGACATTATCTTTTGGTAACTATCACGAACGCACGCCGCTGCTGGCCGATCTGGGTC TGTATCAGGGCGATAAGATCGGGCCTTATGTCGAGGGCACCTATCTGCAAATGCTGAATCAGCGCTTTTTACCGGCGGTG ATGCAGGGGTTGCTGGAGGATTTGAATCAGGCGCCTGCCAATAGCGAGCAAAAACTGACCATTCTGCGTGTAATGCGCAT GCTGGACGATGCTTCTGGGCGCAATAAAGCGCTGGTCGAACAGTTTATGGCGCAACGCTGGCAAAAGGCATTTCCTGCTC AAGGTCAGGTGCAGGAAGAACTGATGCAACATCTGGATTACGCCCTCGATCATACCAACTGGCATCAGTCCCGTGAGCAA AAAGATGCGGTAGCGATTAGCACTTTTGCACCGTTTAATGGGCCGATTACGCTGGCTCAGCAGGAACTAAGCAAACTGCC GATGTATCAGCGCGTTTATCAGAGTCTGGTCATGAAGGCGACTCAAGTGCTGCCGCCGGATTTAGCGATCCGTGATGAAG TCGGGCCGACGTTTGATCCGGTGTTTTCGCTGCGTAACGACAAAGCGGGGAGTGTGCCACGACTGCTAACCTATCCCGGC TTCAGTGATTATTACCTCAAGCAGGACAAAGCGCTGCTAGAGCTGACGGCATTGGATGCCTGGGTTCTGGGACAGCGTGA ACGTGCACAGTTCAGCGAGGCCGATCGGCGGGAAATTCTGCGTCAGGTGAATGACCGCTACATTACGGATTACATCAACC AGTGGCAGAAAGTGTTAGCGAACATTGATGTGCAGGCGCTCGATACGCCAGAACAGGCGCTAGATATCCTCACGGACATT ACCGGTAACGATCAGCCCTTCCAGCGCGTGCTGACGACGGTCAGTGATAACACCCGCATTCGTAAGCTTGCCGATGATGA TAACGACACGGCGCAGAACATCAATACGCGTACTGGTCGTCCGTTTATGACCATCAATGCGGCGCTGAGTGGACGCGGTG AGCAGGGGCCGCTGGTGCAAGAGGTCAATCAGAAACTGACCGATCTCTATCACTATCTCGACCAGATCGTTAACGCGACC GACCCGGGACAGGCGGCATTGAAGGCGATGCAGGCACGGCAGGGAAATAAATTTGCCGATCCGGTATTTGCCTTACAGCA ATATGCTCGCAGCCTCCCTGCGCCGTTGGACCGCTGGGTAGGACAATTAGCCGGAGAGAGCGCCAGTCTGGTGACTGGGC TCGCGATGTCATCGCTGAATCAGGAATGGCTGGATAAAGTCGTGACGCCATTCAACGAGAAGCTGGCGAATCGTTACCCC TTCGATCCGTCATCCGACAAAGATGTGCCGCTATCGGAAATGGAAATGTTCTTCATGACGGGCGGGACGCTGGACAGCTT CTATCAAACCAACCTCAAAGCGATGATGGAAAGCGGCATGCTGGAAGAAGGCATGGCGTCACCTATGCAGGCCGAGCTGA TGAAACAGCTTGAACGCGCTAATCGTATCCGTCAGACCCTGTTTAATGCGCAGGGCAGCCTGGAAGTGCATTTCGTTCTG GAACCGCTGGAATTAACGGCGAACAAGCGCCGCAGCGTGCTGAATCTGGATGGACAGCTACTGGAATACAGCCACGGCCG TCGCCAGAAAACGCCGCTGGTGTGGCCAAACAGTATGCGCGACGGGGCTGAAAGCAAGTTAACACTGGTGCCGGACGATC GTGAGCGCTCGCCGCGCAGCCTGAGCTTTAACGGGCCGTGGGCCATGTTCCGGTTAATCAATAGCGATCAACTGACGAAG GTTAATGAGAACACCTTTGACGTGCGTTTCTCGCTGGAGAATGGGGCGATGACGTATCGCGTTTATACCGATGCCAGCCA TAACCCGTTTGCTGGTGGTCTGTTCAGCCAATTCACGTTGTCTGACTCGCTTTATTAA Protein sequence : MFKTIITFLRKQLPKLKPSWLLLGALLWVVVLVLAWWLGPRLTVGESRPLQGIWGRVVFTLVWLWLAFSYSAWLVWRRVQ LMRSERHEQQVTEQDPLQVYVDGQQTFLDRWLDAFQTQLGKKALYAMPWYLTIGLAGSGKSSLIHRANPANKMNPKLDAE LRDVAAGQQVSSWVGESAVIWDPSGQLLAQPELEGDALGQRHARLWQHLLQWLSENRRRQPLNGLVLTLDISWLAQAGVA DRKAYAQVMRARLQEISVSINTRLPVYIALTRLDMLSGFDKVYRQLNRDARQAVLGVTFTPQASNSKGWLEELERFWDEW VTHLNDNLPDMLLTQSDRSVRNSLFSFVRQLAGVKDYVMEVLTETLAIGEDRAFLIRGVYVSSVYQQGVPFDAFAQSASR RYQLPEPINPALRGESNTFFVQRLFPDVIFPEASLAGENRLHSLYRRRRLSIGVGCMLLAGLVLVGSWHHFYRVNEEAGR NVLTKAQAFIGTNELEGQPGYGYQQLPRLNLIRDATLSFGNYHERTPLLADLGLYQGDKIGPYVEGTYLQMLNQRFLPAV MQGLLEDLNQAPANSEQKLTILRVMRMLDDASGRNKALVEQFMAQRWQKAFPAQGQVQEELMQHLDYALDHTNWHQSREQ KDAVAISTFAPFNGPITLAQQELSKLPMYQRVYQSLVMKATQVLPPDLAIRDEVGPTFDPVFSLRNDKAGSVPRLLTYPG FSDYYLKQDKALLELTALDAWVLGQRERAQFSEADRREILRQVNDRYITDYINQWQKVLANIDVQALDTPEQALDILTDI TGNDQPFQRVLTTVSDNTRIRKLADDDNDTAQNINTRTGRPFMTINAALSGRGEQGPLVQEVNQKLTDLYHYLDQIVNAT DPGQAALKAMQARQGNKFADPVFALQQYARSLPAPLDRWVGQLAGESASLVTGLAMSSLNQEWLDKVVTPFNEKLANRYP FDPSSDKDVPLSEMEMFFMTGGTLDSFYQTNLKAMMESGMLEEGMASPMQAELMKQLERANRIRQTLFNAQGSLEVHFVL EPLELTANKRRSVLNLDGQLLEYSHGRRQKTPLVWPNSMRDGAESKLTLVPDDRERSPRSLSFNGPWAMFRLINSDQLTK VNENTFDVRFSLENGAMTYRVYTDASHNPFAGGLFSQFTLSDSLY |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
aec30 | AAQ96724.1 | Aec30 | Not tested | AGI-1 | Protein | 0.0 | 45 |
pmt1 | AAN64194.1 | Pmt1 | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 45 |
aec30 | YP_851415.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 45 |