Gene Information

Name : Pecwa_1078 (Pecwa_1078)
Accession : YP_003258499.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : DotU family type IV / VI secretion system protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3455
EC number : -
Position : 1166099 - 1166875 bp
Length : 777 bp
Strand : +
Note : TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: type IV / VI secretion system, DotU; KEGG: pct:PC1_3247 type IV / VI secretion system protein, DotU family

DNA sequence : 
ATGAGCATCGAGGTTATTAAGAACGATCAATTGGGCGATCTGCTTTTTGACCACGCCCGACAGTTGGATATGGATTCCGA
CTACTGGTTCCGCCTGCGTGGACAAAGCATTAATCCGATGATTGATGCCGTTACGCCGTTATTGGGCATGGTGGAGCGGG
TACGCCAGCTCTCTGCCTATGAGGGCGTGGAGGATCTCTATCAGCGCGTGGTATCTGAAGTTCAGGCTATCGAACAGGAA
TTGCACTCTCATAGCTATGAGAACGGTGTGATCCTGTCTTTCCGCTACATCCTCTGCACGTTTATTGATGAAGCCGTGAT
GGGGCGGGAGTGGGGTGGACAAAGCATGTGGTCGGCACACTCTCTGCTGACTCGTTTTCATAATGAGACCTGGGGGGGCG
AAAAGGTTTTCGTCCTGCTAGAGAAGCTGTTGGACGATCCTACCCGCTATCGCGACATTCTGGAGTTTATCTACCTCTGC
CTTTGTCTGGGCTTTGAAGGGCGCTATCGGGTGATGACTCAAGGGCGTGAAGAGCTGGATCGCGTCGTGAGTAAGCTACA
TGACACCCTGCGCCCTGAGCCTACGAATGCGCCAACGGTATTCCACCTGAATCTGGGGCAGCAGGCCTCGCGCTACCAAC
TGCGTAGGCAGGTGTCATTGCGCACGTTGTTTATCGGCGTGTGTGTAGCCTTGGTGGCCGCATTCGGCCTGTACCGTTAC
CAGCTTACTCATCAGACCCAGGACGTACTGCGTCAACTGGGAGAATTATTACAATAA

Protein sequence : 
MSIEVIKNDQLGDLLFDHARQLDMDSDYWFRLRGQSINPMIDAVTPLLGMVERVRQLSAYEGVEDLYQRVVSEVQAIEQE
LHSHSYENGVILSFRYILCTFIDEAVMGREWGGQSMWSAHSLLTRFHNETWGGEKVFVLLEKLLDDPTRYRDILEFIYLC
LCLGFEGRYRVMTQGREELDRVVSKLHDTLRPEPTNAPTVFHLNLGQQASRYQLRRQVSLRTLFIGVCVALVAAFGLYRY
QLTHQTQDVLRQLGELLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec26 YP_851419.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-57 49
aec26 AAQ96720.1 Aec26 Not tested AGI-1 Protein 2e-57 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_1078 YP_003258499.1 DotU family type IV / VI secretion system protein VFG2083 Protein 3e-59 46