Gene Information

Name : Pecwa_1077 (Pecwa_1077)
Accession : YP_003258498.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3522
EC number : -
Position : 1164746 - 1166083 bp
Length : 1338 bp
Strand : +
Note : TIGRFAM: type VI hypothetical protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: eca:ECA3438 hypothetical protein

DNA sequence :
ATGTCGAGTCGCAATCGCATTATCTGGCGGGAAGGTTTGTTCATTAAACCGCAGCATTTTCAACAGCAGCAAAGACATAC
CGATTACGCATTGCATGCGCGTCTCAGCGCACTGAGTGATTATTTTTATGGCTTGCAATCGCTGGAGATTAATGAGGAAT
ACCTCAATTTTGGCCGCATCGCACTGGTTAATGCCAGCGGGGTGATGCCTGATGGCACCGTGTTCAATATTCCGGGCGAT
GACGCCTTGCCGCTGCCGTTGGAGATCACCGACGTCGCGCTGGCAAACCAGAAAGTGTATCTGGCACTACCGCTGGCGGT
AAATGGCGTCAGCGAAGTGGGCCAACCGGGACAGGGGATCGCCAGCCGTTTGCAATCACACCGGCATGACGTGCGCGATC
TGCATAGCGACGGCGGCGATATCGTTTCTCTGGAGGTCGGCAAGGTTAGTCTGCGGTTGATGCTCGATCGTGACGATCGC
AGCGCCTATGCCTCGCTGGCGATTGCCAACATTCTGGATAAACGCCCTGACGGCGGCTTGATCCTGGATCCTAATTTTAT
GCCATGCAGCATCAGCGTTACGGCGATCCCTGCCTTAAAACGCTTCCTGGGGGAATCTGCCGGTCTGGTTGCCGAACGTG
CGCGCAGTCTGGCACAGCGTATTGCCGCACCGGGGCAACAGGGCGTGGCGGACGTAGCGGAATTCATGATGCTGCAATTG
CTTAACCGCGCCCAGCCCAGATTGTCGCATCTGGCCCGCCTTGGCACGCTACACCCCGAGCGCCTGCACGAGGCGTTAGT
CGAGCTGTGTGGTGAACTGATGACGTTTACCGATGAGTCGCGCCTGCCGCCTGAATTCCCGGCCTATCGTCATGAACATC
AGCAGGCCAGCTTTGAGCCGCTGATGATGGCGCTGCGTCAAGCCCTGAGCACCGTACTGTCACCGCGTGCCGTTTCCATC
CAACTGAAGAAACAGCCGTATGGTGTGATGGTGGCGATGGTCGGCGATGCGGAATTGATGGCCAGCGCCGAGTTTGTACT
GGCGGTGCGTGCGCGTATGCCGCAGGAGCATCTGCGTAAACAACTGCTGCAACAAACGAAGATTGCCTCCAGCGAGAAGA
TCCGCGAACTGATCAGCCTACAACTGCCTGGCATTCCACTGCTGCCGCTGCCGGTTGCACCGCGTCAACTGCCTTATCAC
GCGGGTTACAGCTATTTCCAACTGGATAGGCAAAGCCCCGCCTGGCAGGTGCTGGTATCTGGCAATACGTTGGCGTTCCA
CATTGCTGGCGAGTTCCCGGAACTGGATATGCAGCTTTGGGCCATCCGCGGTCAGTAG

Protein sequence :
MSSRNRIIWREGLFIKPQHFQQQQRHTDYALHARLSALSDYFYGLQSLEINEEYLNFGRIALVNASGVMPDGTVFNIPGD
DALPLPLEITDVALANQKVYLALPLAVNGVSEVGQPGQGIASRLQSHRHDVRDLHSDGGDIVSLEVGKVSLRLMLDRDDR
SAYASLAIANILDKRPDGGLILDPNFMPCSISVTAIPALKRFLGESAGLVAERARSLAQRIAAPGQQGVADVAEFMMLQL
LNRAQPRLSHLARLGTLHPERLHEALVELCGELMTFTDESRLPPEFPAYRHEHQQASFEPLMMALRQALSTVLSPRAVSI
QLKKQPYGVMVAMVGDAELMASAEFVLAVRARMPQEHLRKQLLQQTKIASSEKIRELISLQLPGIPLLPLPVAPRQLPYH
AGYSYFQLDRQSPAWQVLVSGNTLAFHIAGEFPELDMQLWAIRGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-90 47
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 7e-91 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_1077 YP_003258498.1 hypothetical protein VFG2082 Protein 3e-132 61
Pecwa_1077 YP_003258498.1 hypothetical protein VFG2065 Protein 2e-90 44