Gene Information

Name : Pecwa_1073 (Pecwa_1073)
Accession : YP_003258494.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3519
EC number : -
Position : 1160271 - 1162037 bp
Length : 1767 bp
Strand : +
Note : TIGRFAM: type VI hypothetical protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: pct:PC1_3252 type VI hypothetical protein, VC_A0110 family

DNA sequence :
ATGTCACTGGAACATTTTTTCAGGGATGAGCTGACTTACTTGCGCCTGCAAGGGCGCGAATTCGCCAAGGCGCACCCTGA
GCTTACCCGATTTTTGTCAGAACAAACCACGGATCCAGACGTTGAGCGACTGCTGGAAGGGTTCGCCTTTTTGACAGGGA
GCCTGCGGGCGAAGATCGAGGATGAATTTCCGGAACTGACACACGGTCTGCTGGGCATGCTCTGGCCTAATTACCTGCGT
CCAGTACCGAGCATGACGATGATGCAATTTTCGGTGCATCCTGGCGCGATTGCACAGCCCGCATTTGTTGAGCGCGGTTG
TGAACTCGATAGCCTGCCGATTGATGATGTGGTCTGCCATTTTCAGACCTGTCACGATATCTGGATTTATCCGGCGGATA
TCCGCGAGATTAAGGTACAAAGCGGTAACGATCTTTCCACCATTACGCTGGATATAGGGTTGCATGGCCCGTTATCGCTA
AGCGATCTGCAACTCGACAAGCTGCGCTTTTATCTGGGCGGCGATACCTATACGGCCTACGAACTCTATTTCTGGATCGC
CAGCCAACTGTCGCATATTGAGCTGGAAGTCGATGGCCAACGCTTCCGTCAAGAGGCCAGCGTGCTGAAGACGGTCGGCT
TCGAGCGAGAAGATGCGCTATTACCGTATCCCGGCAATGTCTATTCGGGCTACCGCATCCTGCAGGAATACTTTTGCTTT
CCTGAAAGTTTTCTCTTTTTCCAACTTGCTGGCGCGGTATGGCCGGATCTTCCGCTGACGGTAACGGAGTTCCGTCTGCA
TTTTTGTTTTGATCGTCCGTTGCCAGCGGAGCTGAAGATCCGTCCTGATTCATTCATGCTCAACTGCGTGCCTGCAATCA
ATCTCTTCCGACACGATAGCGAGCCGATCAACCTTAGCGGACGCCAGACGGATTACCCGCTGAAGGCCAGTTACCGTAAC
GCCGATAGCTTTGAAATCTTCTCTGTGGATAAGGTTGAGGGGTGGGTTGAAGGCAATTCAGGTCGTGCTCGGGGTATCCC
ACGCACGTATCAGCCCTTTGAGAGCTTTCAGCACCAAATCGAGCGAGCTAAAGGGCGATTGGCGCTCTATTACCGTATTC
GGATAAGAGAAGCGGTGAACGGCAATGGTTTTGAACACATGCTCTCTTTTGTGCGGGGCGATGAGCGGGAAGTCATTGAT
TTGGATGAATCCATCTCGGTGACTCTGACCTGTACCAATCGGTCGCGTGCGGCACAACTGCCCGTTGGGGCGATTTGTGT
ACCAGCCGGTAACTCACCGTCTTTCGCGACGTTTCGTAATTTGTTACGGCCAACGCGGCCACTGCGGCCTGCGATGGATG
GCAGCCTGCATTGGACGCTGATCTCCAACCTGTCGCTGAACTATGTGTCGCTGCTGCGGCGTGATGCGTTGGTACAGATC
CTACGTACCTACGATTTCCCAGCGCTGCACGACAAGCAGGCGGAACAAGCCTCGCGTAAGCGTCTGGCGGGTATCGAGTC
TATCGAAACCACGCCTATCGATCGCCTGGTTCAGGGGATGCCGGTTCGTGGCTTGAAATCAATCCTGTCTGTACGGCAAT
CCGCGTTTTCCAGTGAAGGAGAACTGTACCTGTTTAGCACGGTGCTGGCGCACTTTTTCTCGCTATACGCCAGCGTCAAC
GCTTTCCACCTGTTGGAAGTGGTCAACATCGATAACAAGGAGCGCTACCGATGGCCGGTACAGATAGGTCAACACTCAAT
GATGTAA

Protein sequence :
MSLEHFFRDELTYLRLQGREFAKAHPELTRFLSEQTTDPDVERLLEGFAFLTGSLRAKIEDEFPELTHGLLGMLWPNYLR
PVPSMTMMQFSVHPGAIAQPAFVERGCELDSLPIDDVVCHFQTCHDIWIYPADIREIKVQSGNDLSTITLDIGLHGPLSL
SDLQLDKLRFYLGGDTYTAYELYFWIASQLSHIELEVDGQRFRQEASVLKTVGFEREDALLPYPGNVYSGYRILQEYFCF
PESFLFFQLAGAVWPDLPLTVTEFRLHFCFDRPLPAELKIRPDSFMLNCVPAINLFRHDSEPINLSGRQTDYPLKASYRN
ADSFEIFSVDKVEGWVEGNSGRARGIPRTYQPFESFQHQIERAKGRLALYYRIRIREAVNGNGFEHMLSFVRGDEREVID
LDESISVTLTCTNRSRAAQLPVGAICVPAGNSPSFATFRNLLRPTRPLRPAMDGSLHWTLISNLSLNYVSLLRRDALVQI
LRTYDFPALHDKQAEQASRKRLAGIESIETTPIDRLVQGMPVRGLKSILSVRQSAFSSEGELYLFSTVLAHFFSLYASVN
AFHLLEVVNIDNKERYRWPVQIGQHSMM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1761 YP_851424.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-124 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_1073 YP_003258494.1 hypothetical protein VFG2078 Protein 1e-154 51