Gene Information

Name : Pecwa_1071 (Pecwa_1071)
Accession : YP_003258492.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 1158353 - 1159831 bp
Length : 1479 bp
Strand : +
Note : TIGRFAM: type VI hypothetical protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: eca:ECA3444 hypothetical protein

DNA sequence :
ATGTCAATAGTTGAAGAACAGGTTCAGGCAGGAGCCGCCAGTGCTTCTGGATCGTTGCTTGATGACATCATGGCTCAAGC
GCGTATCAGCCCGGTTGATGAAGGCTACAGCGTGGCTAAACAGGGCATTGCCGCGCTGGTTGCTAACATTCTTGATAGCG
GTAATGCAGCAGAACCCGTGAATAAAGCGCTGGTCGATAGCATGATCGTCGAACTGGACAAAAAACTTAGCAAGCAGATT
GACGTGATTCTGCATGCAAAAGAATTACAGGAACTGGAATCTTCCTGGCGTTCGATGAAACTGCTTATCGATCGCACTGA
TTTCCGTGAAAACATCAAACTGTTGGTGTTGCATGCGACGAAAGAAGAGCTGTTGGAAGATTTCGAATTCGCCCCTGAAA
TCTCACAGTCTGGCTTCTATAAGCACGTGTATTCCAGCGGTTACGGCCAGTTCGGCGGTCAGCCTATTGGTGGCGTGATC
GGTGACTATGCGCTGACGCAAAGCTCACCAGACATCAAACTGATGCAGTATGTCAGCGCCGTTGGCGCGATGGCGCATGC
ACCGTTCATCTCTTCCGTTGCACCAACCTTCTTTGGCGTGGATCGCTTCACCGATCTGCCTTCAATCAAAGATCTGAAAT
CCGTTTTCGAAGGCCCTGCCTACACGAAATGGCGTTCGCTGCGTGAATCTGAAGACGGCCGCTATCTGGGGCTGACGGCA
CCGCGCTTCCTAGCTCGCTTGCCTTATGATCCGGTAGAAAACCCGATTAAGGGTTTCAACTACAAGGAAGATATCAGCAC
CGATCACGAACACTATCTGTGGGGCAATACCGCTTATCTGATGGGAACGGCATTGACGGACAGTTTCGCGAAATACCGCT
GGTGTCCGAACATTATCGGTCCACAGAGCGGTGGGGCGATTACCGACCTGCCGGTGCATGTTTATGAAGCGATGGGCCAA
CTTCAGGCCAAGATCCCGACTGAAGTGCTGATCACCGATCGTCGCGAATATGAAATGGCCGAAGAAGGCTTTATCACGCT
GACGATGCGTAAAGACAGTGACAATGCCGCCTTCTTCTCCGCTAACTCAGTGCAGAAGCCGAAGGTGTTCCCAAACACCA
AGGAAGGCAAAGAAGCGGAAACCAACTACAAGCTGGGTACGCAACTGCCGTACATGTTCATCATCAACCGTCTGGCGCAC
TACATCAAAGTGCTTCAGCGTGAACAGATTGGCTCATGGAAAGAGCGTCAGGATCTTGAACGTGAGTTGAATACCTGGAT
TAAACAGTACATCGCCGATCAGGAAAACCCGCCGGCAGATGTCCGTAGCCGTCGTCCTCTGCGTGCTGCACAAATCAAAG
TGCTGGATGTGGAAGGAGAACCAGGTTGGTATCAGGTCACTATGTCTGTGCGCCCGCACTTCAAGTACATGGGGGCAAAC
TTTGAGCTGTCGCTGGTAGGGCGTCTGGATAAGGAATAA

Protein sequence :
MSIVEEQVQAGAASASGSLLDDIMAQARISPVDEGYSVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLSKQI
DVILHAKELQELESSWRSMKLLIDRTDFRENIKLLVLHATKEELLEDFEFAPEISQSGFYKHVYSSGYGQFGGQPIGGVI
GDYALTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTFFGVDRFTDLPSIKDLKSVFEGPAYTKWRSLRESEDGRYLGLTA
PRFLARLPYDPVENPIKGFNYKEDISTDHEHYLWGNTAYLMGTALTDSFAKYRWCPNIIGPQSGGAITDLPVHVYEAMGQ
LQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFPNTKEGKEAETNYKLGTQLPYMFIINRLAH
YIKVLQREQIGSWKERQDLERELNTWIKQYIADQENPPADVRSRRPLRAAQIKVLDVEGEPGWYQVTMSVRPHFKYMGAN
FELSLVGRLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 5e-171 70
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 4e-171 70
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 3e-146 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_1071 YP_003258492.1 hypothetical protein VFG2093 Protein 0.0 77
Pecwa_1071 YP_003258492.1 hypothetical protein VFG2475 Protein 3e-154 60