Gene Information

Name : Pecwa_1070 (Pecwa_1070)
Accession : YP_003258491.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 1157817 - 1158320 bp
Length : 504 bp
Strand : +
Note : TIGRFAM: type VI hypothetical protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: eca:ECA3445 hypothetical protein

DNA sequence :
ATGGCAAAAGGAACTGATGGTGCATCTGTCGCACCAAAGGAACGTATTAATATCAAATATGTTCCGGCCACTGGTGGTCA
GCAGGCGGAAATAGAATTGCCGTTGACGCTGATGATCGTGGGAAATATGAAAGGGCGCACAGAGGAAACGCCGATCGAAG
AACGTCAGACCGTATCGATCGATAAGAACAATTTTACCTCCGTGATGAAAGAAGCCAATCTGGAACTGAATTTCAGTGTG
CCAAATCGCCTTGAAGAAGAGAGCCAAGACGACCTGCCAGTGAAACTGAGTATTGCTGGCTTGAATGATTTTTCTCCTGA
CCGCATCGCCCAACAAGTGCCTGAATTACGTAAGTTGCTTGATTTACGTGAAGCATTGGTCGCGCTGAAAGGCCCCCTCG
GCAATATTCCCTCATTCCGTAATCGTTTGCAGGATCTGTTGTCCAGCGAAGAAGCCAGAGAGCAGCTTTTGAAAGAGCTC
GATCTGGTGAAACCCGCCGAATAA

Protein sequence :
MAKGTDGASVAPKERINIKYVPATGGQQAEIELPLTLMIVGNMKGRTEETPIEERQTVSIDKNNFTSVMKEANLELNFSV
PNRLEEESQDDLPVKLSIAGLNDFSPDRIAQQVPELRKLLDLREALVALKGPLGNIPSFRNRLQDLLSSEEAREQLLKEL
DLVKPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 2e-35 54
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 8e-43 51
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 5e-43 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_1070 YP_003258491.1 hypothetical protein VFG2092 Protein 2e-49 61
Pecwa_1070 YP_003258491.1 hypothetical protein VFG2474 Protein 8e-38 50