|
Name : D11S_0084 (D11S_0084) Accession : YP_003254727.1 Strain : Aggregatibacter actinomycetemcomitans D11S-1 Genome accession: NC_013416 Putative virulence/resistance : Unknown Product : ornithine carbamoyltransferase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0078 EC number : - Position : 71609 - 72613 bp Length : 1005 bp Strand : - Note : identified by Glimmer3; putative DNA sequence : ATGGCTTTCAATCTTAAAAACAGACATTTATTAAGTTTGGTAAATCATTCAGAACGTGAAATTAACTATTTGTTGGATTT ATCCCGAGACTTAAAAAGAGCGAAATATGCCGGAACCGAACAACAAAAATTAAAAGGGAAAAACATTGCGTTGATTTTTG AAAAAACCTCCACCCGCACCCGTTGCGCCTTTGAAGTCGCTGCCTATGACCAAGGCGCTCAAGTCACTTACATCGATCCG AATTCCTCCCAAATCGGTCACAAAGAAAGCATGAAAGACACCGCCCGTGTGCTGGGCAGAATGTATGACGCCATTGAATA TCGCGGCTTCAAAAAAGAAATTGTGGACGAATTGGCGGAGTATGCCGGCGTGCCGGTGTTTAACGGGTTAACCGATGAAT TCCACCCGACCCAAATGCTGGCGGACGTGTTAACCATGATTGAAAACTGCGATAAACCGTTGAGCGAAATCAGCTATGTG TATATCGGCGATGCACGCAACAATATGGGGAATTCCTTATTATTAATCGGTGCCAAACTGGGCATGGACGTACGCATTTG CGGGCCTAAAGCCTTATTACCGGATGCGGGACTGGTTGAAATGTGCGAAGGCTTTGCAAAACAAAGCGGCGCGCGCATTA CCGTTACCGACGACATTGATAAAGCAGTGAAAGGCGTGGATTTCGTGCACACCGACGTGTGGGTTTCCATGGGTGAACCG TTAGAAACCTGGGGCGAACGGATTAAATTATTGTTGCCGTATCAAGTGACCCCTGAATTAATGAAACGCACCGGCAATCC GCGGGTGAAATTCATGCACTGCTTGCCGGCGTTTCACAACAGTGAAACCAAAGTGGGTCGTCAAATCGCGGAAAAATACC CGGAACTGGCAAACGGTATTGAAGTCACCGAAGATGTGTTCGAATCCCCGATGAACGTAGCGTTTGAGCAAGCGGAAAAC CGTATGCACACCATTAAAGCCGTACTTTACTCCAGCTTAATCTAG Protein sequence : MAFNLKNRHLLSLVNHSEREINYLLDLSRDLKRAKYAGTEQQKLKGKNIALIFEKTSTRTRCAFEVAAYDQGAQVTYIDP NSSQIGHKESMKDTARVLGRMYDAIEYRGFKKEIVDELAEYAGVPVFNGLTDEFHPTQMLADVLTMIENCDKPLSEISYV YIGDARNNMGNSLLLIGAKLGMDVRICGPKALLPDAGLVEMCEGFAKQSGARITVTDDIDKAVKGVDFVHTDVWVSMGEP LETWGERIKLLLPYQVTPELMKRTGNPRVKFMHCLPAFHNSETKVGRQIAEKYPELANGIEVTEDVFESPMNVAFEQAEN RMHTIKAVLYSSLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0103 | NP_763658.1 | ornithine carbamoyltransferase | Not tested | SCCpbp4 | Protein | 3e-96 | 60 |
| arcB1 | YP_186044.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 3e-92 | 59 |
| argF | YP_493760.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 3e-92 | 59 |
| argF | NP_371693.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 3e-92 | 59 |
| argF | NP_374285.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 3e-92 | 59 |
| argF | NP_645867.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 4e-92 | 59 |
| SAKOR_01090 | YP_008491278.1 | Ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 3e-92 | 59 |
