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Name : rph (D11S_0616) Accession : YP_003255239.1 Strain : Aggregatibacter actinomycetemcomitans D11S-1 Genome accession: NC_013416 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 551636 - 552352 bp Length : 717 bp Strand : + Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGCCCGAATCAACGTGCCAATCACCAACCCCGCCCGATTCAGATCACCCGTCATTACACCAAACACGCGGAAGGTTC CGTGTTGGTGGAATTCGGCGATACCAAAGTGTTGTGTACCGCCTCGGTCGAAGAGAGTGTACCGCGCTTTCTAAAAGGGC AAGGACAAGGTTGGGTGACGGCGGAATACGGCATGTTGCCGCGTTCCACCCACAGCCGTATGCAACGTGAAGCGGCGAAA GGCAAACAAGGCGGACGCACCTTGGAAATTCAGCGTTTAATCGCCCGTTCCTTGCGTGCCATGGTGGATTTGGAAGCCCT CGGCGAGCGTTGTATTACCTTGGATTGCGATGTGATCCAAGCGGACGGCGGCACGCGCACGGCATCCATTACCGGTGCTT GCGTGGCGTTATGCGATGCGCTGAACAGCTTGGTGACAAACGGCACGCTGGCGAAAAACCCGCTGAAAGGTTTGGTTGCC GCCATTTCTGTGGGCATTGTGAACGGCGAAGCGGTGTGCGATTTGGAATATGTGGAAGATTCCGCCGCCGAAACGGACAT GAACGTGGTGATGATGGAAGACGGTCGTATGATTGAAGTGCAGGGCACGGCGGAAGGCAAGCCTTTCAGCCACGAAGAAC TCTTAACCTTGCTCGATCTTGCCAAACAAGGTTGCGACATGATTTTCCAAACCCAACGCGCCACGCTGGCGGAATAA Protein sequence : MRPNQRANHQPRPIQITRHYTKHAEGSVLVEFGDTKVLCTASVEESVPRFLKGQGQGWVTAEYGMLPRSTHSRMQREAAK GKQGGRTLEIQRLIARSLRAMVDLEALGERCITLDCDVIQADGGTRTASITGACVALCDALNSLVTNGTLAKNPLKGLVA AISVGIVNGEAVCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGKPFSHEELLTLLDLAKQGCDMIFQTQRATLAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 3e-60 | 56 |
