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Name : rplS (D11S_0402) Accession : YP_003255031.1 Strain : Aggregatibacter actinomycetemcomitans D11S-1 Genome accession: NC_013416 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 368406 - 368756 bp Length : 351 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGTCTAACATCATTAAACAACTTGAACAAGAACAGTTAAAACAAAACGTGCCTAGCTTTCGTCCGGGTGACACATTAGA AGTTAAAGTATGGGTTGTTGAAGGTAGCAAACGTCGTTTGCAAGCGTTCGAAGGCGTGGTTATTGCAGTTCGTAACCGTG GCTTGCATTCCGCATTTACCTTACGCAAAATTTCCAACGGGGTTGGTGTTGAACGGGTATTCCAAACTCACTCTCCGGCT GTTGACAGCATCGTTGTGAAACGTAAAGGTGCTGTGCGTAAAGCGAAACTTTACTACCTGCGTGAACGTTCAGGCAAATC TGCCCGTATCAAAGAACGTTTGGGTGAATAA Protein sequence : MSNIIKQLEQEQLKQNVPSFRPGDTLEVKVWVVEGSKRRLQAFEGVVIAVRNRGLHSAFTLRKISNGVGVERVFQTHSPA VDSIVVKRKGAVRKAKLYYLRERSGKSARIKERLGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 1e-39 | 87 |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 1e-22 | 55 |
