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Name : D11S_0037 (D11S_0037) Accession : YP_003254680.1 Strain : Aggregatibacter actinomycetemcomitans D11S-1 Genome accession: NC_013416 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 29180 - 31780 bp Length : 2601 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGATTTTAGAAGATAATTTAACCCAACATACTCCCATGATGAAACAATATCTGCAACTTAAAGCAGAGAATCCGGATAT TTTGTTATTTTATCGTATGGGCGATTTTTACGAGCTATTTTACGACGATGCAAAACGCGCCTCCGCCTTGTTGGATATTT CCCTGACCAAGCGCGGGCAATCCGCCGGACAGCCGATTCCTATGGCGGGCGTGCCTTATCATGCGGTGGAAGGCTATTTG GCGAAATTGGTGCAACTGGGTGAGTCGGTGGCGATTTGCGAGCAGGTCGGCGATCCGAATACCGCAAAAGGCCCTGTAGA ACGCCAAATCGTGCGCATTGTCACACCGGGCACCGTGAGCGATGAAGCCCTCTTGCCGGAACGGCAGGATAATCTTATTG CCGCCGTGTATCAGGAAAAAGATCATTTCGGTTTAGCCACGCTGGATATGACCTCCGGCCGTTTTCAAGTGTGCGAGCCG CAATCCCCAGCAGATTTACAAACTGAATTACAACGCATTGCGCCGGTGGAATTGCTTTATTGTGAAGATTTTGCCGATTT TCAGCTAATTGAGCACGCCAAAGGTTTGCGTCGCCGTCCTATTTGGGAATTTGAGCTGAAAACCGCTATTCAACAGCTTT GCCATCAATTTAATACCAAGGATTTACGCGGCTTCGGCGTGGAAAAAGCGATTTTAGGCTTATGCGCCGCCGGTTGTTTA TTGCAGTACGCGCGCGAAACTCAACGCACCGCGTTGCCGCATATTCAGAGCATTTATCTGGTTCAACACAGCGAAAACAT TCAACTGGACGCCGCAACCCGTCGCAACTTGGAACTCACCCAAAATCTGTCGGGGGGCACGGAAAATACGCTGGCAGCGG TGTTAGATAAATGCGTTACGCCAATGGGAAGCCGCTTGCTCAAACGTTGGATTCACCAACCGATTTGCGATGTGGCGAAA CTCATGCAACGCCAACAGGCCATCGGTACGATTTTAGAACAGGATTTAGCGGCGGATTTGCAACCCTATTTACAACAGGT GGGCGACATGGAACGCATTCTGGCGCGCGTGGCGTTACGCACCGTCCGCCCGCGTGATTTAACCCGTTTACGCACCGCTT TGGAGCAGATTCCTTATATTAAAAATCTGTTGGCTGAAAAAACGTCCGCCAAAATGACTGCACTTTACCAACAACTGAGT GATTTTTCCGTGCAATTCGATCTCTTACAACGGGCGATCATTGAAAGCCCACCGGTCTTAATTCGCGACGGTGGTGTTAT CGCGCCGGGCTATCATGCGGAATTGGATGAATGGCGTGCGTTAGCTGATGGTGCCACCCGTTATTTAGAAGAATTGGAAC AGCGTGAGCGGGAAAGCACGGGGATTGATTCGCTAAAAATCGGTTTCAATGCGGTGCACGGCTATTACATTCAAATCAGT CAAGGACAGGCGCACAAAGCGCCGATTCATTATGTGCGTCGCCAAACCCTGAAAAATGCCGAACGCTATATTATTCCCGA ACTTAAAACCTATGAAGATAAAGTGCTGAAGGCAAAAGGCGCTTCCTTGGCGTTGGAAAAACAACTATATGATGAAATCT TTGCTCAATTGTTACCGCACTTAAGCCGTCTGCAACTAGCCGGTTTAGCATTAGCCGAATTAGATGTGCTGACCAACTTA GCGGAGCGGGCGGAGAATTTGAATTATGTGGCGCCGACGTTCTCAGAACAAACCGGCATTCATATTCAAAACGGACGCCA TCCGGTGGTAGAACAAGTGCTGAAAGAACCGTTTATCGCCAACCCGACGGAGCTTACCGAACAGCAACATTTCCTCATCA TTACCGGGCCGAACATGGGCGGTAAAAGCACCTATATGCGCCAAACTGCATTGATTACGCTGATGGCGTACATGGGCAGT TTTGTACCGGCGGACAGCGCCGTTATCGGGCCGATTGATCGCATTTTTACCCGCATCGGTGCCTCCGATGATTTGGCTTC CGGACGCTCAACCTTTATGGTAGAAATGACGGAAATGGCGAATATTTTGCATCAGGCAACGGAGAAAAGTTTGGTGTTAA TTGATGAAATCGGGCGTGGAACCTCCACTTATGATGGGTTGTCTCTGGCTTGGGCATGTGCCGAGTGGCTGGCGAAAAAA ATCCGTTCACTGACCCTGTTCGCCACGCACTATTTTGAATTAACTATTCTACCGGAACAAGTCAATGGTATCGGCAACAT TCACTTGGATGCCATGGAACACAACGACACCATCGCATTTATGCACGCCGTTCAGCATGGCGCCGCAAGCAAAAGCTATG GCTTGGCAGTGGCGGCTTTAGCCGGTGTTCCGCAACAAGTGATCAAGTTAGCGGAGCAAAAACTTGCCCAACTGGAAAAA TTGTCAAACCAAAACACCAATCAGCAAATTCAAGATCTGCGTTTATTGAACCAACGCCAAGGTGAGTTAGCTTTTGAAAG TGCAGAAGATGAGAATAAAGATATGCTGTTGCATATGTTACAAGAATTGGATCCTGACGAATTAAGCCCGAAACAGGCAT TGGCTTATTTATATCAGCTGAAAAAAATGGTGAAAAATTAA Protein sequence : MILEDNLTQHTPMMKQYLQLKAENPDILLFYRMGDFYELFYDDAKRASALLDISLTKRGQSAGQPIPMAGVPYHAVEGYL AKLVQLGESVAICEQVGDPNTAKGPVERQIVRIVTPGTVSDEALLPERQDNLIAAVYQEKDHFGLATLDMTSGRFQVCEP QSPADLQTELQRIAPVELLYCEDFADFQLIEHAKGLRRRPIWEFELKTAIQQLCHQFNTKDLRGFGVEKAILGLCAAGCL LQYARETQRTALPHIQSIYLVQHSENIQLDAATRRNLELTQNLSGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAK LMQRQQAIGTILEQDLAADLQPYLQQVGDMERILARVALRTVRPRDLTRLRTALEQIPYIKNLLAEKTSAKMTALYQQLS DFSVQFDLLQRAIIESPPVLIRDGGVIAPGYHAELDEWRALADGATRYLEELEQRERESTGIDSLKIGFNAVHGYYIQIS QGQAHKAPIHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDEIFAQLLPHLSRLQLAGLALAELDVLTNL AERAENLNYVAPTFSEQTGIHIQNGRHPVVEQVLKEPFIANPTELTEQQHFLIITGPNMGGKSTYMRQTALITLMAYMGS FVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLVLIDEIGRGTSTYDGLSLAWACAEWLAKK IRSLTLFATHYFELTILPEQVNGIGNIHLDAMEHNDTIAFMHAVQHGAASKSYGLAVAALAGVPQQVIKLAEQKLAQLEK LSNQNTNQQIQDLRLLNQRQGELAFESAEDENKDMLLHMLQELDPDELSPKQALAYLYQLKKMVKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D11S_0037 | YP_003254680.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 68 |
