Gene Information

Name : D11S_0351 (D11S_0351)
Accession : YP_003254980.1
Strain : Aggregatibacter actinomycetemcomitans D11S-1
Genome accession: NC_013416
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 323271 - 324077 bp
Length : 807 bp
Strand : +
Note : identified by Glimmer3; putative

DNA sequence :
ATGAAGCCAAATCACGCGTTGAATGACTTACTTCGTTGGGCTAAAATGCCTCGTTCTACCTTTTATTATCAGCAAGTTAA
ACACGATTATCGTGAGATAAAAGAAACTATCTTGTTGCGGTATAAAAGGAACAGAAAACGAGATGGCTATCGCCCAATGA
CACTTAAATTACGTCAAATGGGTTTCCATTTGAATCATAAAACGGTGTTAAAACTGATGAATGCGTTAGGTATTCATTCT
ATTTTACGCAAGAAAAGACATGGAAAACGAGGCAAAACATCGCATATTGCCCCGAATGTGCTAAATCGTGATTTTACAGC
GACGGCGCTCAATCAAAAATGGGTAACCGATGTCACTGAGTTTCGAGTTGGGGAAGAAAAGCTCTATTTTTCACCGTTGA
TGGATTTAGCGAACCGGGAAATTATTGCCTATAATTTTGCGAAACGCCCTAAGTTCTCATTGGTAAAAAGAATGCCGGAA
GAAGGACTTGGCAAACTAAAACCGAGCGAATGCCCGATTATTCACAGCGACCAAGGGGTATTGTACGGCTCAGCAGAATG
GGTAAAGATGTTGGAAGGCAAGGCGATACAAAGTATGAGTCGCCGAGGGAATTGCTATGATAATGCGGTGATTGAAAGCT
TTTTTGCGATATTAAAATCTGAGTGTTTTTACTCACGCACTTATACTTCGATTGCCGAATTACAGGCGGAAATTGAAGAA
TATTTGGTGTATTACAACCAAGAACGAATTAAACTTGATTTAAAAGGATTAAGCCCGGTGCAATACCGAGCTCAATATTT
AAGTTAA

Protein sequence :
MKPNHALNDLLRWAKMPRSTFYYQQVKHDYREIKETILLRYKRNRKRDGYRPMTLKLRQMGFHLNHKTVLKLMNALGIHS
ILRKKRHGKRGKTSHIAPNVLNRDFTATALNQKWVTDVTEFRVGEEKLYFSPLMDLANREIIAYNFAKRPKFSLVKRMPE
EGLGKLKPSECPIIHSDQGVLYGSAEWVKMLEGKAIQSMSRRGNCYDNAVIESFFAILKSECFYSRTYTSIAELQAEIEE
YLVYYNQERIKLDLKGLSPVQYRAQYLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 1e-55 48
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 1e-47 45
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 1e-37 43
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 1e-37 43
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 5e-42 41
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 1e-42 41