|
Name : D11S_0268 (D11S_0268) Accession : YP_003254898.1 Strain : Aggregatibacter actinomycetemcomitans D11S-1 Genome accession: NC_013416 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 245470 - 247581 bp Length : 2112 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : TTGAGCAAAAGTGCGGTGGGAATTTTCGGTATTTTAAAAACGCCGGGAAATCCGACCGCACTTTTTTATAAGCATTTTCT ATTTTTGCAAAATTTATTCACATCAGGAGGCATAATGTCAAATCGTCAACAACTCGCCAATGCAATTCGTTTTTTAAGTA TGGATGCGGTACAAAAAGCGAAATCCGGTCACCCGGGCGCACCTATGGGCATGGCGGATATCGCCGAAGTATTATGGCGT GATTTTTTACACCACAACCCGACCAACCCGCAATGGGCTAACCGCGACCGTTTTGTGCTGTCCAACGGACACGGTTCCAT GCTGATTTACAGCTTATTACACCTCAGCGGTTACGATTTATCCATCGAAGATTTAAAACAATTCCGTCAACTGCACTCCA AAACACCGGGCCATCCTGAATACGGCTACACCCCCGGTGTCGAAACCACCACCGGCCCGTTAGGTCAAGGCATTAGTAAT GCGGTGGGGATGGCAATTGCGGAAAAAACCCTTGCCGGTCAATTTAACCGTGACGGTCATAACATCGTTGATCACTATAC TTACGCCTTTTTAGGCGACGGTTGTTTAATGGAGGGGATTTCCCACGAAGCCTGTTCTTTAGCGGGAACCTTAGGTTTGG GTAAATTAATCGCATTCTATGATGACAACAATATCTCTATCGACGGACACGTTGACGGCTGGTTCACCGACGACACACAA AAACGCTTTGAAGCGTACGGCTGGCAAGTGATTCCGGCAATCGACGGTCACAATCCGGCACAAATTGCCGAAGCCATCAA ACAAGCGCAAGCGGAAACCGCCAAACCAACATTAATTATCTGTAAAACCATTATCGGTTTCGGTTCACCAAATAAATCCA ACTCTCATGACAGCCACGGCGCGCCGTTAGGCGACGAAGAAATCGCTTTAACCCGCAAAGCGTTACATTGGGATTATGCC CCGTTTGAAATTCCGGCGGACATTTATGCGCAATGGGATACCAAAGCAAAAGGCGCGGAATGGGAAAAAGCCTGGGATGA AAAATTTGCCGCGTATGCCAAAGCCTATCCTGAATTAGCGGCTGAATTCACCCGCCGCATAGCGAAAAAACTGCCGGCCG ACTGGGCAAAAGACTCTCAAGCATTTGTTGAGCATTTACAAGCCAATCCGGCAAGCATTGCAAGCCGCAAAGCCTCACAA AATGCCATTGAAGCCTACGCCAAAATTTTACCTGAATTACTGGGCGGTTCTGCCGACTTGGCAAGTTCCAACTTAACCCT TTGGTCCGGTTCCAAACCAATCCGTGCCACCCAAAACGTTGATGGTAACTACATCAACTACGGCGTGCGCGAATTCGGTA TGGCGGGGATCATGAACGGTATCGCCTTGCACGGCGGCTTCATTCCTTACGGCGCCACCTTCCTGATGTTCATGGAATAC GCCCACAACGCCATTCGCATGGCGGCCCTAATGAAGCAACGTTCCTTATTTGTGTTCACCCACGATTCCATCGGCTTAGG CGAAGACGGCCCGACCCACCAACCGGTAGAACAAACTGCGGCATTACGTTTAATTCCTAACTTGAACACATGGCGTCCTT GCGACCAAGTGGAATCCGCCATTGCGTGGAAAGCGGCGATTGAAAGAACGGATGGTCCAAGCGCCTTAATTTTTACCCGC CAAAACTTGGCGCAGATGGACCGCACTTCCGAGCAACTGGCAAATGTGGCGCGCGGGGCGTATGTCTTAAAAGATTGTGC CGGTACGCCGGAACTGATCTTTATCGCCACCGGTTCTGAAGTGGAATTAGCAGTGAAAGCAGCAGAACAATTAACCGCGG AAGGCAAAAAAGTTCGTGTGGTTTCCATGCCAAGCACCAACGTGTTTGATAAACAAGATGAAGCTTATCGCGAATCCGTG TTGCCTGTCGCCGTGACTAAACGTGTCGCCATTGAAGCCGGAATTTCCGACTTCTGGTACAAATATGTCGGCTTCAACGG CCGAATCATCGGTATGCACAGCTTCGGCGAATCTGCACCGGCAGACCAATTATTCAAACTCTTTGGTTTTACGGTGGGTA ACGTCGTCGCCAAGGCAAAAGAAATACTCTAA Protein sequence : MSKSAVGIFGILKTPGNPTALFYKHFLFLQNLFTSGGIMSNRQQLANAIRFLSMDAVQKAKSGHPGAPMGMADIAEVLWR DFLHHNPTNPQWANRDRFVLSNGHGSMLIYSLLHLSGYDLSIEDLKQFRQLHSKTPGHPEYGYTPGVETTTGPLGQGISN AVGMAIAEKTLAGQFNRDGHNIVDHYTYAFLGDGCLMEGISHEACSLAGTLGLGKLIAFYDDNNISIDGHVDGWFTDDTQ KRFEAYGWQVIPAIDGHNPAQIAEAIKQAQAETAKPTLIICKTIIGFGSPNKSNSHDSHGAPLGDEEIALTRKALHWDYA PFEIPADIYAQWDTKAKGAEWEKAWDEKFAAYAKAYPELAAEFTRRIAKKLPADWAKDSQAFVEHLQANPASIASRKASQ NAIEAYAKILPELLGGSADLASSNLTLWSGSKPIRATQNVDGNYINYGVREFGMAGIMNGIALHGGFIPYGATFLMFMEY AHNAIRMAALMKQRSLFVFTHDSIGLGEDGPTHQPVEQTAALRLIPNLNTWRPCDQVESAIAWKAAIERTDGPSALIFTR QNLAQMDRTSEQLANVARGAYVLKDCAGTPELIFIATGSEVELAVKAAEQLTAEGKKVRVVSMPSTNVFDKQDEAYRESV LPVAVTKRVAIEAGISDFWYKYVGFNGRIIGMHSFGESAPADQLFKLFGFTVGNVVAKAKEIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 77 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 68 |
