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Name : D11S_1978 (D11S_1978) Accession : YP_003256551.1 Strain : Aggregatibacter actinomycetemcomitans D11S-1 Genome accession: NC_013416 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1901553 - 1901960 bp Length : 408 bp Strand : + Note : identified by Glimmer3; putative DNA sequence : ATGGATTTAGCGAACCGGGAAATTATTGCCTATAATTTTGCGAAACGCCCTAAGTTCTCATTGGTAAAAAGAATGCCGGA AGAAGGACTTGGCAAACTAAAACCGAGCGAATGCCCGATTATTCACAGCGACCAAGGGGTATTGTACGGCTCAGCAGAAT GGGTAAAGATGTTGGAAGGCAAGGCGATACAAAGTATGAGTCGCCGAGGGAATTGCTATGATAATGCGGTGATTGAAAGC TTTTTTGCGATATTAAAATCTGAGTGTTTTTACTCACGCACTTATACTTCGATTGCCGAATTACAGGCGGAAATTGAAGA ATATTTGGTGTATTACAACCAAGAACGAATTAAACTTGATTTAAAAGGATTAAGCCCGGTGCAATACCGAGCTCAATATT TAAGTTAA Protein sequence : MDLANREIIAYNFAKRPKFSLVKRMPEEGLGKLKPSECPIIHSDQGVLYGSAEWVKMLEGKAIQSMSRRGNCYDNAVIES FFAILKSECFYSRTYTSIAELQAEIEEYLVYYNQERIKLDLKGLSPVQYRAQYLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | NP_370590.1 | transposase | Not tested | Type-II SCCmec | Protein | 3e-08 | 41 |
| SA0062 | NP_373302.1 | transposase | Not tested | Type-II SCCmec | Protein | 3e-08 | 41 |
| SE0101 | NP_763656.1 | transposase | Not tested | SCCpbp4 | Protein | 3e-11 | 41 |
