Gene Information

Name : D11S_1867 (D11S_1867)
Accession : YP_003256444.1
Strain : Aggregatibacter actinomycetemcomitans D11S-1
Genome accession: NC_013416
Putative virulence/resistance : Unknown
Product : Na+/H+ antiporter NhaC
Function : -
COG functional category : R : General function prediction only
COG ID : COG2056
EC number : -
Position : 1804251 - 1805603 bp
Length : 1353 bp
Strand : +
Note : identified by Glimmer3; putative

DNA sequence :
ATGTTAACCAACCCTGTTGTCATTTCGATCATCGTATTGCTGGCACTTAGTTTGCTCCGCATTAACGTGGTCATCGCATT
GGTGATTTCCGCCTTAACTGCCGGTTTAGTCGGTAATTTAGGCTTGACTAAAACCATCGAAGCCTTTACCGGCGGACTTG
GCGGCGGTGCGGAAGTTGCTATGAACTATGCGATGCTCGGCGCTTTTGCTATTGCCATCTCCAAATCCGGCATTACCGAT
TTACTTGCCTACAAAATCATCACCCGCATGAATAAAGTGCCAACCGCAAACAGCCTTGCCATGTTCAAATATGCCATGCT
CGGTATCCTAACGCTGTTCGCTATTTCTTCCCAAAACCTGCTGCCGGTACACATTGCCTTTATTCCTATCGTCATTCCGC
CGATGCTCGCCATTTTCAACAAATTGAAAATTGACCGCCGTGCGGTGGCTTGTGTGCTGACCTTCGGTTTAACCGCCACC
TATATGTTATTGCCGGTGGGTTTCGGAAAAATCTTTATCGAAAGCATTCTGGTGAAAAATATCAACACCGTAGGCAATTC
ATTAGGCTTACAAACCAGCGTGGGCGAAGTGTCACTGGCAATGACCATTCCCGTGATCGGCATGGTTTTGGGGTTGTTAA
CCGCCGTGTTTATCACTTATCGCAAACCGCGCGAATACGTAGTGATGAGCACCGAGCCGACAACCCAAGACATTGAACAA
CACATTGCCAACATCAAACCGAAACAAATTGTGGCAAGTTTAATCGCCATCGTCGCCACCTTCACAGTGCAATTAGTCAC
CAGTTCCACCATCATCGGCGGCTTGGTCGGTTTAATTATCTTCGCCGTATTTGGCATTTTTAAACTCAAAGAAAGCAACG
ATATTTTCCAACAAGGCTTGCGTTTAATGGCGATGATCGGCTTTGTGATGATCGCCGCCTCCGGTTTCGCCAACGTCATT
AACACCACAACCGGCGTGAAAGAGCTAATAGACGTGTTAAGCACCAGTGTGATTCAAAGCAAAGGCGCCGCCGCATTCCT
GATGTTGCTCGTGGGTTTGCTCATCACCATGGGTATCGGTTCTTCTTTCTCTACCGTACCGATTATTACTTCCATTTATG
TGCCGTTGTGTTTATCTTTCGGCTTCTCGCCGCTTGCCACCGTGTCTATTGTCGGCGTAGCGGCTGCGCTGGGCGATTCA
GGTTCACCGGCATCCGACTCGACGTTGGGGCCGACTTCCGGTTTGAATATGGACGGCAAACACGACCACATTTGGGATTC
CGTGGTGCCGACCTTTATTCACTACAACATTCCGTTAATTATCTTCGGCTGGATTGCCGCGGTGTATCTGTAA

Protein sequence :
MLTNPVVISIIVLLALSLLRINVVIALVISALTAGLVGNLGLTKTIEAFTGGLGGGAEVAMNYAMLGAFAIAISKSGITD
LLAYKIITRMNKVPTANSLAMFKYAMLGILTLFAISSQNLLPVHIAFIPIVIPPMLAIFNKLKIDRRAVACVLTFGLTAT
YMLLPVGFGKIFIESILVKNINTVGNSLGLQTSVGEVSLAMTIPVIGMVLGLLTAVFITYRKPREYVVMSTEPTTQDIEQ
HIANIKPKQIVASLIAIVATFTVQLVTSSTIIGGLVGLIIFAVFGIFKLKESNDIFQQGLRLMAMIGFVMIAASGFANVI
NTTTGVKELIDVLSTSVIQSKGAAAFLMLLVGLLITMGIGSSFSTVPIITSIYVPLCLSFGFSPLATVSIVGVAAALGDS
GSPASDSTLGPTSGLNMDGKHDHIWDSVVPTFIHYNIPLIIFGWIAAVYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00352 YP_008207817.1 putative permease Not tested AbaR25 Protein 7e-109 53
BJAB0868_00356 YP_008211682.1 putative permease Not tested AbaR26 Protein 7e-109 53
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-92 52
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-92 52
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-92 52
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 2e-92 52