Gene Information

Name : D11S_1820 (D11S_1820)
Accession : YP_003256400.1
Strain : Aggregatibacter actinomycetemcomitans D11S-1
Genome accession: NC_013416
Putative virulence/resistance : Virulence
Product : hemolysin-activating lysine-acyltransferase HlyC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2994
EC number : -
Position : 1760787 - 1761293 bp
Length : 507 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence : 
ATGGAGAAAAATAATAATTTTGAAGTGTTAGGGTATGTGGCTTGGTTATGGGCAAATTCTCCTTTGCATAGAAATTGGTC
TTTATCATTACTTGCTATTAATGTACTGCCTGCAATTCAATATGGGCAATATACATTATTAATGAGAGATGGGGTTCCTA
TTGCTTTTTGTAGCTGGGCAAATTTAAGCCTTGAGAATGAGATAAAATATCTTGAAGATGTATCATCTCTTGTTTATGAC
GATTGGAATTCCGGTGATCGTAAATGGTTTATTGATTGGATTGCGCCATTTGGTCACAATTATGTGCTTTATAAACATAT
GCGTAAATCATTTCCCTATGATTTATTCAGATCAATTCGTGTTTATAAAGGTTCGTCAGAGGGCAAAATTACTGAATTCC
ATGGAGGTAAAGTCGATAAACAATTAGCTAATAAAATCTTTCAACAATATCATTTTGAGTTAATCAATGAATTAAAAAAC
AAATCTGAAGTTATATCTATTAATTAA

Protein sequence : 
MEKNNNFEVLGYVAWLWANSPLHRNWSLSLLAINVLPAIQYGQYTLLMRDGVPIAFCSWANLSLENEIKYLEDVSSLVYD
DWNSGDRKWFIDWIAPFGHNYVLYKHMRKSFPYDLFRSIRVYKGSSEGKITEFHGGKVDKQLANKIFQQYHFELINELKN
KSEVISIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyC CAD42040.1 HlyC protein Virulence PAI II 536 Protein 6e-54 72
hlyC CAD33758.1 hemolysin C Virulence PAI I 536 Protein 3e-54 72
hlyC NP_755444.1 hemolysin C Virulence PAI I CFT073 Protein 9e-53 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D11S_1820 YP_003256400.1 hemolysin-activating lysine-acyltransferase HlyC VFG1559 Protein 2e-54 72
D11S_1820 YP_003256400.1 hemolysin-activating lysine-acyltransferase HlyC VFG1499 Protein 1e-54 72
D11S_1820 YP_003256400.1 hemolysin-activating lysine-acyltransferase HlyC VFG0905 Protein 3e-53 71
D11S_1820 YP_003256400.1 hemolysin-activating lysine-acyltransferase HlyC VFG0842 Protein 3e-51 64
D11S_1820 YP_003256400.1 hemolysin-activating lysine-acyltransferase HlyC VFG0158 Protein 2e-31 42