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Name : potB (D11S_1765) Accession : YP_003256347.1 Strain : Aggregatibacter actinomycetemcomitans D11S-1 Genome accession: NC_013416 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter membrane protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 1698431 - 1699291 bp Length : 861 bp Strand : + Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component DNA sequence : ATGAAGATAATCAATAATAAATTCCAGAAAATTACTGTTGCGATTATCTTCAGCTGGCTAATCTTCTTCGTGCTGATCCC AAACTTATTGGTATTAGTCGTAAGTTTTTTAACCCGAGATGGTAGCAACTTTTATACCTTGCCATTTAACTTTGAAAACT ACATCAACCTGTTTAATCCGCTTTATGCGCAGGTGGTGTGGAACTCATTGTATATGTCAATCATTGCCACCATTATTTGT TTACTAATCGGTTATCCGTTTGCCTTTATGGTCAGTAAAATTCACCCGAAATATCGACCGCTCTTATTGTTCCTTGTGGT GTTGCCGTTCTGGACAAACTCGCTTATTCGTATTTACGGCATGAAAGTGTTCCTCGGCGTGAAAGGCGTATTGAACACCA TGTTATTGGAAATGGGTATTTTGAGTGAACCGATTCGGATTCTGAACACCGAAGTGGCGGTGATTATCGGTTTGGTGTAT TTGCTTCTGCCGTTCATGATTCTGCCGCTCTACTCCGCCATTGAAAAGTTAGACGGACGCTTATTGGAAGCGGCAAAAGA CTTGGGGGCAAACGCGTTCCAACGATTCTTCCGCGTGATTCTGCCGTTGACCATGCCGGGCATCGTTGCAGGCTGCTTGT TGGTATTATTGCCGGCAATGGGAATGTTTTATGTAGCGGACTTACTCGGCGGCGCGAAAGTGTTGCTTGTGGGTAACGTG ATTAAGAGCGAATTCTTAATTTCCCGCAACTGGCCGTTCGGCTCCGCAATCAGTATCGGATTGACCATTTTGATGGCATT ACTCATCTTCGTGTATTACCGCGCGAATAAATTATTGAACAAAAAAGTGGAGTTGGAATAA Protein sequence : MKIINNKFQKITVAIIFSWLIFFVLIPNLLVLVVSFLTRDGSNFYTLPFNFENYINLFNPLYAQVVWNSLYMSIIATIIC LLIGYPFAFMVSKIHPKYRPLLLFLVVLPFWTNSLIRIYGMKVFLGVKGVLNTMLLEMGILSEPIRILNTEVAVIIGLVY LLLPFMILPLYSAIEKLDGRLLEAAKDLGANAFQRFFRVILPLTMPGIVAGCLLVLLPAMGMFYVADLLGGAKVLLVGNV IKSEFLISRNWPFGSAISIGLTILMALLIFVYYRANKLLNKKVELE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 5e-75 | 61 |
