Gene Information

Name : D11S_1655 (D11S_1655)
Accession : YP_003256238.1
Strain : Aggregatibacter actinomycetemcomitans D11S-1
Genome accession: NC_013416
Putative virulence/resistance : Virulence
Product : ascorbate-specific PTS system enzyme IIC
Function : -
COG functional category : S : Function unknown
COG ID : COG3037
EC number : -
Position : 1585240 - 1586448 bp
Length : 1209 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence :
GTGCTGGGTGGCGGTGCCGGCGTGTTGGTGGGTTCGTTGACGCCGTTGGGCGGGATGTTTGAACATGGCTTTAACGTGCA
GGGGATTATCCCGAATAATGAAGCCATTGTGTCCATGGCGGTAGAAAAATACGGCACGGCGACGGCACTGATTATGGCGT
TCGGCATGGTGGCGAATATTTTGGTCGCGCGTTTTACCCGCTTAAAATTCATTTTCTTAACCGGTCACCACACCTTTTAT
ATGGCGTGTATGATTGCGGTGATTTTAACCGTTGCCGGTTTGGAAGGCATGGAATTGATTGTTGCCGGATCCCTGACTTT
AGGCTTGATTATGGCGTTTTTCCCGGCGTTGGCGCATTTTTATATGAAGAAAATCACAGGTAGTAATGATGTGGGTTTCG
GGCATTTCGGTACTTTGGGTTATGTGCTTTCCGGCGCCATCGGTCAGGCGGTGGGTAAAGGATCCAAATCCACGGAAGAA
ATGGATTTGCCGAAAAATCTAAGCTTCCTGCGTGACAGTTCCATTTCCATTTCACTGACCATGATGGCGATTTATTTCAT
TCTTGCCATCGCTTCCGGCAGTGAATATGTGACGGCGCATTTCAGTAACGGACAACATTATTTGGTGTATGCGGCGATTC
AAGCCATTACCTTCGCAGCTGGCGTGTTCATCATCTTGCAAGGGGTGCGTTTGATTTTGGCTGAAATCGTGCCGGCATTT
ACCGGGATTTCCGAGAAGCTCGTGCCGGATGCCAAACCTGCGCTGGATTGCCCGATCGTCTTCCCGTACGCACCGAATGC
GGTGTTAATTGGTTTTCTTGCCAGTTTCGTGGGTGGGATCGTCGGCTTGGCGTTACTCAATCAATTACACTGGGTGTTAA
TTCTGCCCGGTGTTGTACCGCACTTTTTCTGTGGCGCCACAGCCGGGGTGTTCGGTAACGCCACCGGTGGTCGTCGCGGC
GCAATTTTAGGCGCATTTGCACACGGCGTGTTGATTACCTTCTTGCCGATATTCTTATTGCCGGTCTTGGGTTCTCTTGG
TTTTGCCAATACCACCTTCTCCGATTCGGACTTCGGCGGTGTGGGTATTGTGCTGGGCTACATGGCGCAATATTTCTCCA
AAGAGATGATTTTAATCTCCGTGGTGAGTGTTTTCCTGTTGCTGGTGGGCTATAACTACATTGCGAAAAAAACAACAGAG
CAAAAATAG

Protein sequence :
MLGGGAGVLVGSLTPLGGMFEHGFNVQGIIPNNEAIVSMAVEKYGTATALIMAFGMVANILVARFTRLKFIFLTGHHTFY
MACMIAVILTVAGLEGMELIVAGSLTLGLIMAFFPALAHFYMKKITGSNDVGFGHFGTLGYVLSGAIGQAVGKGSKSTEE
MDLPKNLSFLRDSSISISLTMMAIYFILAIASGSEYVTAHFSNGQHYLVYAAIQAITFAAGVFIILQGVRLILAEIVPAF
TGISEKLVPDAKPALDCPIVFPYAPNAVLIGFLASFVGGIVGLALLNQLHWVLILPGVVPHFFCGATAGVFGNATGGRRG
AILGAFAHGVLITFLPIFLLPVLGSLGFANTTFSDSDFGGVGIVLGYMAQYFSKEMILISVVSVFLLLVGYNYIAKKTTE
QK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 3e-106 61
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 3e-106 61
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 3e-106 61