Gene Information

Name : D11S_1457 (D11S_1457)
Accession : YP_003256052.1
Strain : Aggregatibacter actinomycetemcomitans D11S-1
Genome accession: NC_013416
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1384508 - 1386589 bp
Length : 2082 bp
Strand : -
Note : catalyzes branch migration in Holliday junction intermediates

DNA sequence :
ATGAGCACCCAATTATTAGATGCGATTCCGTTAACGGCAATTTCCGGTGTTGGTGCCGCTGTGGCGGAAAAGTTAGGTAA
ATTGGGGATCTTCAATCTGCAAGATCTGTTATTTCACCTTCCCCTCCGTTATGAAGATCGCACCCGCATCACACCCATTG
CCGATTTGCAGGCAGAGCAGTACGCCACTATTGAAGGCGTCGTGCAAAGTAGCGAAGTGCAATTCGGGCGTCGTCCGATG
TTGATGGTCTATCTTTCCGACGGTACCGCCAAATTGGCGTTGCGCTTTTTTAATTTTAACGCCGGTATGAAAAACAGCTT
GCAGCCAGGTGCTCGGGTGAAAGCCTTTGGTGAGGTGCGTCGCGGGCGTTTCATGGCGGAAATTCATCATCCTGAATATC
AGATTATTCATGACAATAAACCGCTGGTTCTGGCAGAAACCCTCACGCCCATTTACCCTGCTACGGAAGGGTTGAAACAA
ACCGCTTTGCGAAAATTAATTGCGCAAGCCTTGTTGGTGTTGGATAAAACGCCCATAGCCGAATTGTTACCGGCGGAATG
TAATCCGCATCCTTTTGATTTAAAATTCGCCATTCAGTTCTTACATAACCCGCCACCCGATGTGTCATTAACGACCTTGG
AAGAAGGTAGACATCCCGCCCAGCAACGACTGATTTTTGAAGAGTTGCTGGCATATAACCTGGCGATGCAAAAAGTGCGG
TCAGGAATTCAAGCGAATTTTGCCGAGCCTTTGTCGTATCAATCAGATTTAAAAGCACGTTTTTTAGCGCAGTTGCCGTT
TCAGCCGACAAATGCACAGTTGCGTGTGACGGAAGATATTGAACGGGATGTGGCGCAACCTTACCCGATGATGCGTCTGG
TGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTG
GCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCA
AGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAA
TGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCAC
CGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATCAGGCAGGCGTGTATCCTCATCAGTTAATCATGAC
CGCCACACCGATTCCACGTACGCTTGCCATGACGGTGTATGCGGATTTGGATACTTCGATTATCGACGAATTGCCACCGG
GGCGCACGCCGATTACCACCATTGCAATTTCCGAAGATCGTCGTGCAGAGATTATCGAACGGGTGAATGTGGCGTGTACG
CAGGAAAAACGGCAGGCTTATTGGGTTTGCACTCTGATTGATGAATCGGAAATGTTGGAGGCGCAGGCGGCGGAAGCGGT
GGCGGAAGATCTCCGTAAAATTCTACCGCACTTACGCATCGGCTTGGTACACGGGCGAATGAAACCGAATGAAAAACAAG
CGGTAATGGCGCAGTTTAAGCTTGCCGAATTAGATTTACTGGTCGCTACGACCGTGATTGAAGTGGGCGTGGATGTGCCG
AATGCCAGTTTGATGATTATTGAAAACGCTGAGCGCCTTGGCTTGTCCCAGCTTCACCAGTTACGTGGGCGGGTCGGGCG
TGGCAGTACAGCTTCGTTTTGTGTGTTAATGTACAAACCGCCGCTCGGTAAAATTTCGCAAAAACGCTTACAAGTCATGC
GCGACACGCAGGATGGTTTCGTGATTTCGGAAAAAGATCTGGAAATTCGTGGTCCGGGGGAAGTGCTTGGCACGAAACAA
ACAGGAATTACCGAATTTAAAGTGGCGAACCTCATGCGCGATCGCAAAATGCTGCCGACAGTGCAGTTTTATGCAAAACA
ACTAGTACAGAAATATCCGCAAACGGCGGACTTGTTGATTCGCCGCTGGCTAAATAATCGTGAGATTTATAGCAATGCCT
GA

Protein sequence :
MSTQLLDAIPLTAISGVGAAVAEKLGKLGIFNLQDLLFHLPLRYEDRTRITPIADLQAEQYATIEGVVQSSEVQFGRRPM
LMVYLSDGTAKLALRFFNFNAGMKNSLQPGARVKAFGEVRRGRFMAEIHHPEYQIIHDNKPLVLAETLTPIYPATEGLKQ
TALRKLIAQALLVLDKTPIAELLPAECNPHPFDLKFAIQFLHNPPPDVSLTTLEEGRHPAQQRLIFEELLAYNLAMQKVR
SGIQANFAEPLSYQSDLKARFLAQLPFQPTNAQLRVTEDIERDVAQPYPMMRLVQGDVGSGKTLVAALAALLAIDNGKQV
ALMAPTEILAEQHAVNFRRWFEPLGIQVGWLAGKVKGKQRVAELEKIKSGAVQMVVGTHALFQEEVEFHRLSLVIVDEQH
RFGVHQRLMLREKGNQAGVYPHQLIMTATPIPRTLAMTVYADLDTSIIDELPPGRTPITTIAISEDRRAEIIERVNVACT
QEKRQAYWVCTLIDESEMLEAQAAEAVAEDLRKILPHLRIGLVHGRMKPNEKQAVMAQFKLAELDLLVATTVIEVGVDVP
NASLMIIENAERLGLSQLHQLRGRVGRGSTASFCVLMYKPPLGKISQKRLQVMRDTQDGFVISEKDLEIRGPGEVLGTKQ
TGITEFKVANLMRDRKMLPTVQFYAKQLVQKYPQTADLLIRRWLNNREIYSNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 4e-100 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D11S_1457 YP_003256052.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 60