|
Name : hslU (D11S_0146) Accession : YP_003254784.1 Strain : Aggregatibacter actinomycetemcomitans D11S-1 Genome accession: NC_013416 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 132774 - 134105 bp Length : 1332 bp Strand : - Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGTCTGAGATGACTCCGCGTGAAATAGTCTCTGAATTAGATCAACATATTATCGGGCAAAGTGAAGCGAAAAGAGCGGT GGCAATTGCATTGCGCAATCGCTGGCGCAGAATGCAGTTGCAGGAGCCGATGCGTTATGAAGTGACACCGAAAAATATTT TAATGATTGGTCCGACCGGGGTGGGAAAAACCGAAATCGCCCGTCGCTTGGCAAAGTTAGCCAATGCACCGTTCATTAAA GTGGAAGCCACCAAATTTACCGAAGTAGGCTATGTGGGGAAAGAAGTGGATTCCATTATCCGCGACTTAACCGACAGCGC TATGAAACTGGTGCGTCAGACGGAAATTGAAAAAAATCGCGTGAAAGCGGAAGAAGCGGCGGAAGAACGTATTTTAGACG CCTTATTGCCGGCGGCGAAAAACCAATGGGGCGAAATGGAAAACCGCGATGTACAAAACAATACCCGTCAGATTTTCCGT AAGAAATTACGTGAAGGTGAGCTTGATGATAAAGAAGTGGAGATTGATGTCGCCGGTGTGCCGATGGGCGTGGAAATTAT GGCACCTCCGGGCATGGAAGACATGACCAGCCAGCTGCAATCCATGTTCCAGAATCTGTCCAGCGGGCAAACCAAGAAAC GCAAAATGAAAATTAAGGATGCGTTAAAAACTTTAGTTGATGACGAGGCGGCGAAATTGGTGAATCCGGAAGAGCTGAAA CAAAAAGCTATTGATGCGGTGGAACAAAACGGTATCGTGTTTATTGATGAAATTGATAAAATCTGTAAAAAAGGCGAATA TAGCGGGGCGGATGTGTCCCGTGAAGGCGTGCAGCGCGACTTGCTACCACTGGTGGAAGGTTCTACCGTTAACACCAAGC ACGGCATGGTGAAAACCGATCATATTCTGTTTATTGCCTCCGGCGCATTCCAAGTGGCGCGCCCGTCCGATTTGATCCCG GAATTACAGGGGCGTTTGCCGATTCGCGTGGAATTGTCGGCACTCACCGCTGGTGATTTTGAGCGCATTCTAGCCGAACC GAATGCCTCTTTAACGGAGCAATACAAAGCCTTGATGGCGACGGAAGGCGTGAACATTGAATTCACCCAAGATGCCATTA AGAAAATCGCCGAGGCGGCATTCCGCGTGAATGAGAAAACCGAGAACATCGGCGCCCGCCGGTTGCATACGGTGATGGAA CGTTTGATGGATAAAATTTCCTTCAACGCCAGCGATATGGACGGACAAACTGTCAGCATTGACGCGGCGTATGTCAGCGA AGCGCTCGGCGATGTCATCGAGAACGAAGATTTAAGCCGCTTTATTCTTTAA Protein sequence : MSEMTPREIVSELDQHIIGQSEAKRAVAIALRNRWRRMQLQEPMRYEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK VEATKFTEVGYVGKEVDSIIRDLTDSAMKLVRQTEIEKNRVKAEEAAEERILDALLPAAKNQWGEMENRDVQNNTRQIFR KKLREGELDDKEVEIDVAGVPMGVEIMAPPGMEDMTSQLQSMFQNLSSGQTKKRKMKIKDALKTLVDDEAAKLVNPEELK QKAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVNTKHGMVKTDHILFIASGAFQVARPSDLIP ELQGRLPIRVELSALTAGDFERILAEPNASLTEQYKALMATEGVNIEFTQDAIKKIAEAAFRVNEKTENIGARRLHTVME RLMDKISFNASDMDGQTVSIDAAYVSEALGDVIENEDLSRFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 2e-98 | 47 |
