Gene Information

Name : D11S_0135 (D11S_0135)
Accession : YP_003254773.1
Strain : Aggregatibacter actinomycetemcomitans D11S-1
Genome accession: NC_013416
Putative virulence/resistance : Unknown
Product : Transposition helper protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 120428 - 121321 bp
Length : 894 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence :
ATGGAAAAACAATATGAGTATGTTCACGAAAAATTCCGTCATTTAGTGATTGCAAGCAATCAGGAACGGATTGAGTTTTT
AGATGAACCACGTTGGGTAGGTTATGCCGTTGCAAATAAGATCATTGATAATTTGGTTTCCTTAATGAATAAGCCGAAAC
GCCCTCGCATGTTCAATTTGTTGGTAGTCGGTGATTCTAACAATGGTAAAACGACGCTTATTCGACACTTTTATGATTTG
TACGGCATACCTTTCGTGGACAGCCAGTCGGACGGTATACGCCCCATTATTTTGGCAGAAGCACCGCCGAGTGCAAATGA
AAAAGAGCTTTATATCTCGTTACTGGAGCGTTTTTATGTTCCATATCGACCAACGGATAGCGTAGCTAAATTGCGTTATC
AGACGATTCACTTATTCCGTGAGTACAAGGTGAAAATGCTGATTATTGACGAATTCCATTCGTTGCTTGTGGGGACACCG
CGTTTGCAACGCCAAGTGATGAATGCGATTAAGATGCTATGTAATGAGTTGCAGATTCCGATTGTAGGCGTAGGCACAAA
AGATGCAATTCGTGTTTTACACACCGATCCGCAACACGCCAGTCGTTTTGATGTAGCAGAGTTGCCAACATGGAAATTAG
ATAAGGATTTTCAAAAATTACTCTTCCAATTTCAAGGTATTTTGCCATTGAAAAAATGCTCTAATCTACAATCGCCAGAG
TTAGCGACAAAAATTCATACGATTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGCCATTGAAGC
GATTACAACAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAA
AAATTATCGGATAA

Protein sequence :
MEKQYEYVHEKFRHLVIASNQERIEFLDEPRWVGYAVANKIIDNLVSLMNKPKRPRMFNLLVVGDSNNGKTTLIRHFYDL
YGIPFVDSQSDGIRPIILAEAPPSANEKELYISLLERFYVPYRPTDSVAKLRYQTIHLFREYKVKMLIIDEFHSLLVGTP
RLQRQVMNAIKMLCNELQIPIVGVGTKDAIRVLHTDPQHASRFDVAELPTWKLDKDFQKLLFQFQGILPLKKCSNLQSPE
LATKIHTISGGNLGNVHRLLTACAIEAITTGTEQITLDIIEHNSWVQPTQGLRKIIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tniB ADZ05761.1 transposition helper protein Not tested AbaR11 Protein 9e-65 51
tniB AFH57218.1 putative transposase Not tested AbaR4c Protein 9e-65 51
BJAB07104_00250 YP_008207715.1 putative ATPase, putative transposase Not tested AbaR25 Protein 1e-64 51
tniB AFV47962.1 transposition protein TniB Not tested AbaR25 Protein 9e-65 51
BJAB0868_00257 YP_008211583.1 putative ATPase, putative transposase Not tested AbaR26 Protein 1e-64 51
tniB AFV47990.1 transposition protein TniB Not tested delta-AbaR25 Protein 9e-65 51
ABZJ_00232 YP_005524188.1 putative transposition helper protein Not tested AbaR22 Protein 1e-64 51
tniB AEO37450.1 TniB transposition protein Not tested AbaR4 Protein 1e-64 51
tniB AFC76427.1 TniB Not tested AbaR5 Protein 1e-64 51
1_17 CAJ77012.1 Transposition Helper Not tested AbaR1 Protein 9e-65 51
ABZJ_00251 YP_005524207.1 putative transposition helper protein Not tested AbaR22 Protein 1e-65 50