Gene Information

Name : D11S_1328 (D11S_1328)
Accession : YP_003255929.1
Strain : Aggregatibacter actinomycetemcomitans D11S-1
Genome accession: NC_013416
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1254719 - 1254958 bp
Length : 240 bp
Strand : +
Note : identified by Glimmer3; putative

DNA sequence :
ATGTTGGAAGGCAAGGCGATACAAAGTATGAGTCGCCGAGGGAATTGCTATGATAATGCGGTGATTGAAAGCTTTTTTGC
GATATTAAAATCTGAGTGTTTTTACTCACGCACTTATACTTCGATTGCCGAATTACAGGCGGAAATTGAAGAATATTTGG
TGTATTACAACCAAGAACGAATTAAACTTGATTTAAAAGGATTAAGCCCGGTGCAATACCGAGCTCAATATTTAAGTTAA

Protein sequence :
MLEGKAIQSMSRRGNCYDNAVIESFFAILKSECFYSRTYTSIAELQAEIEEYLVYYNQERIKLDLKGLSPVQYRAQYLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0166 YP_281530.1 transposase Not tested Not named Protein 2e-05 45
unnamed CAD42036.1 hypothetical protein Not tested PAI II 536 Protein 2e-06 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D11S_1328 YP_003255929.1 integrase catalytic subunit VFG1555 Protein 1e-06 44