Gene Information

Name : D11S_1136 (D11S_1136)
Accession : YP_003255742.1
Strain : Aggregatibacter actinomycetemcomitans D11S-1
Genome accession: NC_013416
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein QseB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1051719 - 1052390 bp
Length : 672 bp
Strand : +
Note : identified by Glimmer3; putative

DNA sequence : 
ATGCGGATTTTATTAATCGAAGATGATCCTTTAATCGGTAACGGCATTCAAATTGGGTTGACCAAATCCGGTTTCGCCGT
GGATTGGTTTACCGACGGCAAAACCGGATTGGAAGCGGCGCAGTCGGCGCCTTATGATGCAGTGGTGCTGGATTTAACCT
TGCCGAAAATGGACGGGCTGGATGTGTTGCAGGCATGGCGTAAAAACGGGCAGGATGTGCCGGTGCTGATTCTTACCGCG
CGGGATACTCTGGATGAGCGCATTACCGGCTTGCAACGCGGTGCGGACGATTATTTGTGTAAGCCGTTTGCCCTGGCGGA
AGTGGTGGCACGTTTGCAGGCACTGATTCGTCGTCGCTACGGACACGCCAACCCGATTATTCAACATAGCCGGGTGAAAT
TCGATCCGAATCAACGAAAGGTTTTTCTGTGCGATCAGGAAATTGCCCTGACCACCCGTGAATATAAACTGCTTGAACTC
TTTATGTTGAATAAAGAACGCGTGCTGACCCGCGATTTTATTGAAGACAAACTTTATAACTGGGATAACGAAGTGAGCAG
TAACGCGCTGGAAGTGCATATTTACAACCTGCGCCAAAAGCTCGGCAAACAATTTATTCGCACCGTTCACGGCGTGGGCT
ATGCACTGGGAAAAAATGATGAAACTGAGTAA

Protein sequence : 
MRILLIEDDPLIGNGIQIGLTKSGFAVDWFTDGKTGLEAAQSAPYDAVVLDLTLPKMDGLDVLQAWRKNGQDVPVLILTA
RDTLDERITGLQRGADDYLCKPFALAEVVARLQALIRRRYGHANPIIQHSRVKFDPNQRKVFLCDQEIALTTREYKLLEL
FMLNKERVLTRDFIEDKLYNWDNEVSSNALEVHIYNLRQKLGKQFIRTVHGVGYALGKNDETE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-39 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D11S_1136 YP_003255742.1 transcriptional regulatory protein QseB BAC0487 Protein 4e-41 46
D11S_1136 YP_003255742.1 transcriptional regulatory protein QseB BAC0638 Protein 6e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D11S_1136 YP_003255742.1 transcriptional regulatory protein QseB VFG0473 Protein 2e-40 44
D11S_1136 YP_003255742.1 transcriptional regulatory protein QseB VFG1390 Protein 2e-32 42