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Name : GYMC61_0888 (GYMC61_0888) Accession : YP_003252037.1 Strain : Geobacillus sp. Y412MC61 Genome accession: NC_013411 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 890077 - 891738 bp Length : 1662 bp Strand : + Note : PFAM: type II secretion system protein E; general secretory system II protein E domain protein; SMART: ATPase AAA; KEGG: gka:GK2629 ATPase involved in pili biogenesis DNA sequence : ATGAGCAAAAAGCAGGAACGGAAACGGCTTGGTGATTTGCTTGTCGAAGCGGGATTGATCACCGAAAGTCAGCTGGCCGA GGCGCTGCGCGAGAAGGCGCCCGGGCAAAAGCTCGGCGACGCCTTGTTGCAGCGCGGCTACATCACGGAACAGCAGCTGA TTGAGGCGCTCGAGTTTCAGCTCGGCATTCCGCACGTCAGTTTGTACCGGTACCCGATCGATCCGAAAGCGACAAACCTC GTGCCGAAAGAGTTTGCCCGCCGCCATATGGTCATGCCGCTCAAGGTGGAAGGCGATCGGCTGCTCGTTGCCATGGCCGA TCCGATGGATTTTTTTGCCATCGACGATTTGCGCCTGTCGACCGGGTTTCAAATTGAAACGGCGATCGCTTCAAAAGACG ATATTTTGCGGGCGATCAATAAATATTACGACATCGACGAAGCATTTGAGGATTTTTTGCAAACGCCGCCTGAGGTGCGC GACGACGAGCGGGCTGCTGAGGACGATTCTCCCATCGTTCGTTTGGTGAACCAAATTTTGCAGCTTGCTGTTGAACAGCG GGCGAGCGACATTCATATCGATCCACAGGAGACGAAAGTGCTCATCCGCTATCGGATCGACGGCCTGCTTCGCACCGAGC GCGCGCTGCCGAAACATATGCAAAGCATGTTGACGGCGAGAATTAAAATTTTGGCCAATATGGACATCACCGAACACCGC GTGCCGCAAGACGGACGGATCAAAATGGACATCGATTTTCATCCGGTCGATTTGCGCGTTTCAACGCTGCCGACCGTATA CGGTGAGAAAATCGTCATGCGCGTCCTCGACTTGGGCGCAGCTTTAAACGATATTCATAAACTTGGCTTCAATCCGGTTA ATTTAGATCGATTCATCCGCTTGATCGAGCGGCCGAACGGCATCGTCTTGATCACCGGACCGACCGGTTCGGGGAAATCG TCGACGCTCTATGCGGCGCTCAACCATTTAAACAGCGAGCACGTGAACATTATTACGATTGAAGATCCAGTCGAATATCA GATCGAGGGCGTCAACCAAATTCAAGTCAACCCGAATGTCGGCTTGACGTTCGCCCAAGGGCTCCGCTCGATTTTGCGTC AAGACCCGAACATCATCATGGTTGGAGAGATTCGCGACCGCGAGACGGCGGAAGTGGCGATCCGCGCTTCGCTCACCGGT CATTTAGTGTTGAGCACGCTCCATACGAACGATGCATTAAGCACGATCACCCGCCTGATCGATATGGGGATTGAGCCGTT TTTAGTGGCCACATCGCTCGCCGGCGTTGTCTCGCAGCGGCTTGTGCGCCGCGTCTGCCGCGACTGCCAAGAGGTGTATG AGCCGACGAAGCGGGAGCTGGACATTTTCGCCCGCCGCGGCATCGAGGTTCATCAACTTGTCCGCGGCCGCGGCTGCCCG ATGTGCAACATGACCGGTTACCGCGGACGGCTGGCGATTCACGAGTTGCTTGTTGTCACCGATGAGATGCGGCGCGTCAT TTTAAACAACGAGCCGTTTTCGAAATTGCGCGAGCTTGCCCTGCAAAACAAAATGATTTTTTTGCTGGATGATGGGCTGT TGAAAGTGAAGCAAGGGTTGACCACGCTTGAAGAAGTGCTGAAAGTGGCCATTTTGCATTGA Protein sequence : MSKKQERKRLGDLLVEAGLITESQLAEALREKAPGQKLGDALLQRGYITEQQLIEALEFQLGIPHVSLYRYPIDPKATNL VPKEFARRHMVMPLKVEGDRLLVAMADPMDFFAIDDLRLSTGFQIETAIASKDDILRAINKYYDIDEAFEDFLQTPPEVR DDERAAEDDSPIVRLVNQILQLAVEQRASDIHIDPQETKVLIRYRIDGLLRTERALPKHMQSMLTARIKILANMDITEHR VPQDGRIKMDIDFHPVDLRVSTLPTVYGEKIVMRVLDLGAALNDIHKLGFNPVNLDRFIRLIERPNGIVLITGPTGSGKS STLYAALNHLNSEHVNIITIEDPVEYQIEGVNQIQVNPNVGLTFAQGLRSILRQDPNIIMVGEIRDRETAEVAIRASLTG HLVLSTLHTNDALSTITRLIDMGIEPFLVATSLAGVVSQRLVRRVCRDCQEVYEPTKRELDIFARRGIEVHQLVRGRGCP MCNMTGYRGRLAIHELLVVTDEMRRVILNNEPFSKLRELALQNKMIFLLDDGLLKVKQGLTTLEEVLKVAILH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-86 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-86 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GYMC61_0888 | YP_003252037.1 | type II secretion system protein E | VFG2048 | Protein | 6e-87 | 44 |
| GYMC61_0888 | YP_003252037.1 | type II secretion system protein E | VFG1880 | Protein | 1e-87 | 41 |
