Gene Information

Name : GYMC61_0552 (GYMC61_0552)
Accession : YP_003251714.1
Strain : Geobacillus sp. Y412MC61
Genome accession: NC_013411
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 558817 - 559797 bp
Length : 981 bp
Strand : +
Note : PFAM: transporter permease; KEGG: gka:GK2899 ferrichrome ABC transporter (permease)

DNA sequence : 
ATGCGTAAGCGTGATGTGGGACTTGTGGCTGGGTTGGCATTGCTTCTTGTCATCATCGTGCCGCTCGGCGCTTGTTTCGG
GGATGTGAAAATCCCTGTTTCGCAAGTATGGGAGGCATTTTTCAACCGAAAGTCTTCCCTGAATGGGGAAATCGTGTGGG
AATATCGCTTGCCAAGGATATTGGTCGGGCTGTTTGTCGGCGCCAACCTCGCCGTATCCGGAGCGCTGTTGCAAGCCGTG
ACGCAAAACCCGCTTGCCGCTCCGAATGTCATTGGCATGACGGCTGGCGCCAGCTTATTTGCTGTGCTGGCGCTGCTGAT
CATTCCGCATTTTCCTGTCAGCGGCCTGCCGTTCGTCACCTTTTTCGGGGCTCTCTTCGCCGGCCTTTGCGTGTATGCGT
TTGCTTGGAAGAAAGGAATGGATAAGGGCCGGTTTGCCCTATCGGGGATTGCTTTTGATGCCTTGTTTCAGGCCGTCATT
ACAGGGATTTTGGTTTTTGCGACCAAAGGAATTGATGCCGCGGTCATTTGGTTGGCGGGGAGTTTATGGGGACGGACATG
GGAACATGTTTTTCTCATCGCTCCTTGGTCAGTTGTTGGACTCGGACTCGCTTATCTTTGTTATCGCCGCATGAATGTCT
TGCAGCTGCACGATGATGTGGCCGCAAGCTTGGGAATGCGTGTTCAGGCGGCGCGTTTCCTGATCTTCCTCATCGCGGTC
GGCTTGTGTGGAAGCGCCGTAGCTGTATCGGGTCCGATCGGATTTTTGGGACTGGTCATCCCCCATCTTGCCCGTTTGTT
GACAAGGGCCGATTATCAGCTGCTCATTCCGGTCAGCGCCTTATTAGGAGCGATTTTGATGATCAGCGCGGATACGGCAG
GAAGAACCATCGCGGCGCCAATCGAAATTCCGGTCGGCATCTTAACGGCATTCATCGGTGCGCCGTATTTTCTCTTTCTG
CTTCGACGAGCAAAATTATAA

Protein sequence : 
MRKRDVGLVAGLALLLVIIVPLGACFGDVKIPVSQVWEAFFNRKSSLNGEIVWEYRLPRILVGLFVGANLAVSGALLQAV
TQNPLAAPNVIGMTAGASLFAVLALLIIPHFPVSGLPFVTFFGALFAGLCVYAFAWKKGMDKGRFALSGIAFDALFQAVI
TGILVFATKGIDAAVIWLAGSLWGRTWEHVFLIAPWSVVGLGLAYLCYRRMNVLQLHDDVAASLGMRVQAARFLIFLIAV
GLCGSAVAVSGPIGFLGLVIPHLARLLTRADYQLLIPVSALLGAILMISADTAGRTIAAPIEIPVGILTAFIGAPYFLFL
LRRAKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 3e-42 43
DIP0584 NP_938960.1 iron transport system membrane protein Virulence Not named Protein 5e-34 42
ciuC YP_005681254.1 Iron ABC transporter permease Virulence PiCp 4 Protein 1e-29 41
ciuC YP_005683345.1 Iron ABC transporter permease Virulence PiCp 4 Protein 1e-29 41
ciuC YP_003783390.1 iron ABC transporter permease Virulence PiCp 4 Protein 1e-29 41
ciuC YP_005685431.1 Iron ABC transporter permease Virulence PiCp 4 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC61_0552 YP_003251714.1 transporter permease BAC0163 Protein 2e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC61_0552 YP_003251714.1 transporter permease VFG1043 Protein 2e-42 43