Gene Information

Name : GYMC61_3066 (GYMC61_3066)
Accession : YP_003254108.1
Strain : Geobacillus sp. Y412MC61
Genome accession: NC_013411
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 3120786 - 3121541 bp
Length : 756 bp
Strand : -
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gka:GK0784 hypothetical protein

DNA sequence :
ATGAGAGCAGAGGTGAAAGAGATTTGTAAAGCGCTGCATTTGGCCTATATCGCAGATCGATTCGAGGAGGTGAGATTCGA
AACGAAAGAACAGTTTTTGCGGGATGTATTGGCGCTGGAACTGTCGTGCCGCCAAGAAGCGAAACAGGCCCGACTGATCA
AGAAAGCCAAGTTTCGGGAGTTGAAATGGCTGAAGGATTACGAATGGTCGGATCACATCCACTGGCCGACCACGACATCG
AAGAAGGAATTGTGTGACCTTCGCTTTTTGGAGCGAAAGCAAAACGTTCTGCTTTTAGGCTCGCCCGGGACAGGAAAAAC
CCATCTCGCCACAGCGCTCGGCATCCAGGCGTGCCAACAAGGCCATGAGGTTCGGTTTTTCCGCGTCGCGGATCTTGTCG
CCCAGCTGGAAGAGGCGTTGAAAAACGGCACGCTCGGGCGGCTGAAACGAAGCATCGATGCGTGCGAACTGTTGATATTG
GATGAACTCGGCTATGTGCCGTTTCAAAAGCAAGGATCGGAGCTGTTGTTTCATATTATCGCCGACTGTTACGAGCGAAA
AAGCGTCATGGTGACATCGAATCTAGAATTTGGACAGTGGGATCGGGTGTTTGGGGACAACCGCTTGACAGCTGCGCTGG
TGGATCGCTTGGTTCACCATGCCCACATCCTGGCCTTTACGAGAGCTATCGACTGCGGAACGCTCTCTCCGCGATCCAGC
CGTCCTCTTCCCCCGGTCTGCAACCTTAAGTCTTGA

Protein sequence :
MRAEVKEICKALHLAYIADRFEEVRFETKEQFLRDVLALELSCRQEAKQARLIKKAKFRELKWLKDYEWSDHIHWPTTTS
KKELCDLRFLERKQNVLLLGSPGTGKTHLATALGIQACQQGHEVRFFRVADLVAQLEEALKNGTLGRLKRSIDACELLIL
DELGYVPFQKQGSELLFHIIADCYERKSVMVTSNLEFGQWDRVFGDNRLTAALVDRLVHHAHILAFTRAIDCGTLSPRSS
RPLPPVCNLKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 1e-33 43
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 6e-36 43
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-35 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-35 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-35 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-35 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-35 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-35 42
unnamed CAA21402.1 - Not tested HPI Protein 2e-35 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-35 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 2e-35 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-35 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 2e-35 42
istB AAN62229.1 putative NTP-binding protein of insertion sequence Not tested PAGI-3(SG) Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC61_3066 YP_003254108.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 6e-34 43
GYMC61_3066 YP_003254108.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 3e-36 43
GYMC61_3066 YP_003254108.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 1e-35 42
GYMC61_3066 YP_003254108.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 1e-35 42
GYMC61_3066 YP_003254108.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 1e-35 42