Gene Information

Name : GYMC61_2913 (GYMC61_2913)
Accession : YP_003253968.1
Strain : Geobacillus sp. Y412MC61
Genome accession: NC_013411
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0491
EC number : -
Position : 2969065 - 2970474 bp
Length : 1410 bp
Strand : -
Note : PFAM: beta-lactamase; Rhodanese domain protein; SMART: rhodanese; KEGG: gka:GK2088 hypothetical protein

DNA sequence :
ATGTTCTTTCGTTCATTTTTTTATGAACAATTAGCTCATATGTCTTACTTAGTTGGATGCCAACGAACAGGTGAGGCAAT
CGTTATTGACCCAGGTCGCAACGTTGATTGGTATATCGATACAGCGAAAAAAGAAGGATTGCGAATAGTAGCTGCAGCAG
AAACACACATCCATGCTGACTTCGTTTCAGGAGCCAAAGAATTAGCGAAATGTTGTGGAGCAAAACTGTATTTATCGGAT
GAAGGAGATGAGAACTGGAAATATCAATATTTAAATGAAGTTGATTACGAGCTTGTGAAGGAGGGAAGCATTTTTACAGT
AGGAAACGTTGAGTTTCAAGTGATTCATACACCAGGGCATACACCAGAGCATATTTCGTTCATCTTAACTGATAAAGGCG
GCGGCGCAAAAGAGCCGATGGGCATTTTTACAGGTGACTTCGTTTTTGTTGGGGACGTTGGCCGTCCGGACCTGCTTGAA
AAAGCAGCAGGGATTTCCGGCACAGCGGACATTGGCGCTCGTCAAATGTTCCAATCGCTAAAAAAATTCAAAGCACTCCC
AGATTATTTAAAAGTATGGCCGGCGCACGGAGCAGGAAGTGCATGCGGGAAGGCACTTGGTGCTGTTCCTTCTTCAACGG
TTGGATATGAAAAGCTGACCAACTGGGCGCTAAAAATTGAAGATGAAGAAGAGTTTGTGAAACTATTGCTTGCAGGGCAA
CCGGAGCCGCCGAAATATTTTGCAATGATGAAACAAGTGAATAAAATTGGTCCTGAATATTTGAATGAAAAAGAAGTACC
AGTGTTGTCAACACGTGAGCAACTCGACGAGTATCAAGCAAACGGAGCGTTTATTTTAGACGTTCGTCCGCCTCAAGAAT
TTGCGAATGCACATTATGCAGGATCCATCAACATTCCGTTTAACAAATCATTTACAAACTGGGCAGGTTGGTTCATTAAC
TATGACCAAGACATTGTGTTGATTGCAAGTCAAGAAGATGTACAAGCGATTCGCAAAGCGCTTGCTTATATTGGGTTGGA
CCGCATTGTTGCGTACATTGAACCAGTCGTTGCATTAAGCGGTGAAGTAGAGAGATATGAAGAAATTGATGTGCAACAAT
TGCGTCAATATTTACAAGACGAGCATTATCACCTTATTGATGTGCGCAATCAAGCAGAATGGGACGAAGGATATATTGAA
GGGGCGCAACATATTATGCTCGGCGCGCTTGCTGATCGTTTAAACGAGATTCCAGAAGGAAAAACGTACATTGTTCAATG
TCAATCAGGTGCGCGCTCAGCAATTGGCGCAAGTATCTTACAAGCAAAAGGGGTAAAACAGGTGCTGAATTTAAAAGGTG
GGTATTTAGCGTGGGTGCAAGAAAAGCTTCCAATTGCCAGAAAAGCATAA

Protein sequence :
MFFRSFFYEQLAHMSYLVGCQRTGEAIVIDPGRNVDWYIDTAKKEGLRIVAAAETHIHADFVSGAKELAKCCGAKLYLSD
EGDENWKYQYLNEVDYELVKEGSIFTVGNVEFQVIHTPGHTPEHISFILTDKGGGAKEPMGIFTGDFVFVGDVGRPDLLE
KAAGISGTADIGARQMFQSLKKFKALPDYLKVWPAHGAGSACGKALGAVPSSTVGYEKLTNWALKIEDEEEFVKLLLAGQ
PEPPKYFAMMKQVNKIGPEYLNEKEVPVLSTREQLDEYQANGAFILDVRPPQEFANAHYAGSINIPFNKSFTNWAGWFIN
YDQDIVLIASQEDVQAIRKALAYIGLDRIVAYIEPVVALSGEVERYEEIDVQQLRQYLQDEHYHLIDVRNQAEWDEGYIE
GAQHIMLGALADRLNEIPEGKTYIVQCQSGARSAIGASILQAKGVKQVLNLKGGYLAWVQEKLPIARKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SACOL0046 YP_184956.1 metallo-beta-lactamase Not tested Type-I SCCmec Protein 9e-93 43
unnamed BAA86645.1 hypothetical protein Not tested Type-I SCCmec Protein 6e-93 43
unnamed BAB83478.1 - Not tested SCC 12263 Protein 2e-93 43