|
Name : araD (GYMC61_2736) Accession : YP_003253800.1 Strain : Geobacillus sp. Y412MC61 Genome accession: NC_013411 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : - Position : 2789017 - 2789703 bp Length : 687 bp Strand : - Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGCTTGAGGAATTGAAACAAGCCGTATTAGAGGCCAACCTGCAGCTCCCGCAATACCGCCTCGTGACGTTTACGTGGGG AAATGTGAGCGGGATTGACCGGGAGCGCGGGTTGGTTGTCATTAAGCCAAGCGGGGTGGCGTATGACAAGTTGACCATTG ATGATATGGTGGTCGTGGATTTAAATGGAAATGTGGTGGAAGGGGGCTTAAAACCGTCGTCGGACACTCCTACCCATCTT TGGTTGTATAAACAATTTCCGGAAATCGGGGGAATTGTTCATACCCACTCGACTTGGGCGACTGTTTGGGCGCAGGCCGG AAAAGGAATTCCGGCATTAGGAACGACACACGCAGACTATTTCTATGGGGAAATTCCGTGCACCCGTCCAATGACCAATG AAGAAATTCAGGGAGCCTATGAACTAGAGACTGGAAAGGTCATTACGGAAACGTTCCGCTTTCTCGACCCGTTGCAAATG CCAGGTGTTTTGGTGCACGGCCATGGCCCGTTTGCTTGGGGGAAAGATCCAGCGAACGCGGTTCATAATGCCGTTGTCTT GGAAGAAGTAGCGAAAATGGCGGCAAGAACGTACATGCTCAATCCAAATGCACAGCCGATCAGCCAAACGCTGCTTGATC GCCACTATTTGCGCAAGCATGGCGCAAACGCTTACTATGGGCAGTAA Protein sequence : MLEELKQAVLEANLQLPQYRLVTFTWGNVSGIDRERGLVVIKPSGVAYDKLTIDDMVVVDLNGNVVEGGLKPSSDTPTHL WLYKQFPEIGGIVHTHSTWATVWAQAGKGIPALGTTHADYFYGEIPCTRPMTNEEIQGAYELETGKVITETFRFLDPLQM PGVLVHGHGPFAWGKDPANAVHNAVVLEEVAKMAARTYMLNPNAQPISQTLLDRHYLRKHGANAYYGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 2e-63 | 62 |
