Gene Information

Name : GYMC61_1763 (GYMC61_1763)
Accession : YP_003252872.1
Strain : Geobacillus sp. Y412MC61
Genome accession: NC_013411
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1787374 - 1789512 bp
Length : 2139 bp
Strand : -
Note : PFAM: ATPase AAA; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gtn:GTNG_0856 ATP-dependent Clp protease-like (class III stress gene)

DNA sequence :
ATGCGCTGCCAAGCATGCCAACAACGTGAAGCAACGGTGTTTGTCAACTTGCAATGGAACGGTGAAAAACAACAACTTCA
CCTGTGCCATGAATGCTATGAAAACAAAAAACAACAATTGTCGATTCCGATGATGAACTTCGGCTTTTCGCCGTTTTCCT
TTGATGACTTCTTTACTAGCCCGTTCACAGCCGCCAACGCGGGGATGAGCTCGCCAGAAACGATGGCGAAACGCCCGCAA
AGCCATAGCGGCGGATTTTTGGATCAGTTTGGCCGCAACTTGACGCAAATGGCCAAAGCGGGCTTGATCGATCCGGTCAT
CGGCCGCGACAAAGAAATCGCACGCGTCATGGAAATTTTAAACCGCCGCAACAAAAACAACCCGGTGTTGATTGGGGAGC
CGGGCGTCGGGAAAACGGCCATCGTTGAAGGGCTGGCGCTGAAAATTGCCGAAGGGCAAGTGCCAGAAAAACTGTTGAAC
AAAGAAGTGTACTTGCTTGACGTCGCTTCGCTTGTTGCCAACACCGGCATCCGCGGCCAATTTGAAGAGCGGATGAAACG
GCTCATCGCCGAACTGCAAGAGCGGAAAAACATCATCTTGTTCATTGACGAAATCCATCTGCTCGTCGGTGCTGGAGCCG
CTGAAGGCTCGATGGACGCGGGCAACATTTTAAAACCGGCGCTTGCCCGCGGCGAGCTGCAAGTCGTTGGGGCGACGACA
CTCAAAGAATACCGGCAAATTGAAAAAGACGCGGCTCTTGAGCGCCGCTTCCAACCGGTCATCGTCCAGGAGCCGACCGT
TGAGGAAGCGATCGCCATCTTAAAAGGCATTCAGCCAAAATATGAACAATTCCATCATGTCCGCTATACGGACGAAGCGA
TCGAAGCGTGCGTGAAATTGTCGCACCGCTACATTCAAGACCGCTTCCTCCCGGACAAGGCGATCGACTTGCTTGACGAG
GCCGGCTCGAAAGCGAACTTGCGCCTCGGCCCGACCGATGAAAAACAACTGCAAGAGCGGTTGATCCAAATCGCGAAAGA
AAAAGAACAAGCTGCGAAAGAGGAAAACTATGAACTGGCGGCGAAACTGCGCGCTGAAGAGCTGAAGCTTGAGAAACAAC
TCGAGCAAGGCGTCACCCAAGAACGCCCAACAGTCGATGTGGCGGACATCGAGCAAATCATTGCCGAGAAAACCGGCATC
CCGGTCGGCAAACTGCAAGCCGATGAAAAAGAAAAAATGAAACATCTCGAAGAAAACTTGGCGAAAAAAGTGATCGGCCA
AGCGGAGGCGGTGAAAAAAGTCGCGAAAGCCATTCGCCGCAGCCGCGCCGGCTTGAAAGCGAAACACCGCCCGATCGGTT
CGTTCTTGTTCGTCGGCCCGACCGGCGTCGGGAAAACGGAGCTCGCCAAAACGCTCGCCGAGGAGCTGTTTGGCACAAAA
GACGCCATGATTCGCCTCGATATGAGCGAATACATGGAGAAACATTCCGTCTCGAAGCTGATCGGTTCGCCGCCGGGCTA
TGTCGGCTTTGAAGAAGCCGGCCAGCTGACGGAAAAAGTGCGCCGCAACCCATACAGCATCATCTTGCTTGACGAGATTG
AAAAAGCGCACCCGGATGTGCAGCACATCTTCCTACAAATTTTGGAAGACGGCCGCTTAACCGACAGCCAAGGCCGCACC
GTCAGCTTCAAAGACACGGTCATCATTGCGACAAGCAACGCCGGCGCAACCGATAAAAAAATCACCGTCGGCTTTGAAAA
AGAGGGCAACGGGCAAACAAGCGTCCTTGACTCGCTCAGCGCCTACTTCAAGCCGGAATTTTTGAACCGCTTCGACGCCA
TCATCGAGTTCAAGCCGCTCGAAAAAGCGCACTTGCTTGAGATCGTCGACCTGATGCTCGCTGACGTCAAAGCAGCGATG
CGCGAACAAGGCATTGAACTCGAAGTGACCGAAACGGCGAAAGAAAAACTGGCCGAACTCGGCTACCATCCGGCCTTCGG
CGCCCGCCCGCTCCGCCGCGTCATCCAAGAGCATGTCGAAGACAACATCGCTGACTGCCTGCTTGACGCGGATCAATCGG
TGCGCGCAATCCGCATCGACGTTGAAGGGGACGCCATTGTGGCGAAAATCGAATCATAA

Protein sequence :
MRCQACQQREATVFVNLQWNGEKQQLHLCHECYENKKQQLSIPMMNFGFSPFSFDDFFTSPFTAANAGMSSPETMAKRPQ
SHSGGFLDQFGRNLTQMAKAGLIDPVIGRDKEIARVMEILNRRNKNNPVLIGEPGVGKTAIVEGLALKIAEGQVPEKLLN
KEVYLLDVASLVANTGIRGQFEERMKRLIAELQERKNIILFIDEIHLLVGAGAAEGSMDAGNILKPALARGELQVVGATT
LKEYRQIEKDAALERRFQPVIVQEPTVEEAIAILKGIQPKYEQFHHVRYTDEAIEACVKLSHRYIQDRFLPDKAIDLLDE
AGSKANLRLGPTDEKQLQERLIQIAKEKEQAAKEENYELAAKLRAEELKLEKQLEQGVTQERPTVDVADIEQIIAEKTGI
PVGKLQADEKEKMKHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGSFLFVGPTGVGKTELAKTLAEELFGTK
DAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRT
VSFKDTVIIATSNAGATDKKITVGFEKEGNGQTSVLDSLSAYFKPEFLNRFDAIIEFKPLEKAHLLEIVDLMLADVKAAM
REQGIELEVTETAKEKLAELGYHPAFGARPLRRVIQEHVEDNIADCLLDADQSVRAIRIDVEGDAIVAKIES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 5e-156 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC61_1763 YP_003252872.1 ATPase AAA VFG0080 Protein 0.0 64
GYMC61_1763 YP_003252872.1 ATPase AAA VFG0079 Protein 8e-155 54