Gene Information

Name : GYMC61_1696 (GYMC61_1696)
Accession : YP_003252808.1
Strain : Geobacillus sp. Y412MC61
Genome accession: NC_013411
Putative virulence/resistance : Resistance
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1720051 - 1720725 bp
Length : 675 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK0908 two-component response regulator

DNA sequence : 
ATGGCACGAATTTTAGTCGTCGATGATGATGCTCATATTCGCGAACTCGTCAGCCACTTTTTAAGCTTGGAAGGATTTAC
AATCCACGAGGCGGCTAACGGAAAAGAGGCGCTTGATGTGCTGGAAACGGTGAAAGTGGATTTGGTCATTATGGATATTA
TGATGCCGGAAATGGACGGATGGGAGCTATGCCGCGAACTGCGCGACTATGACGATGTGCCGATTTTGATGTTGACGGCC
AAAGGGGAAACGAAACAAAAAGTGAAGGGATTCGAGCTTGGGGCGGACGATTATCTCGTCAAACCGTTCGACCCGCTTGA
ACTCGTCGCCCGGGTCAAAGCATTGCTCAAACGGTATCGAATCACCACCTCGCAAATCGTGCAAATCGGCCATTTATCGT
TAAACCGCAAGACGTACGAATGCCGTTTGGGAGACCAAGAGATCACCTTACCGCCGAAAGAATTCGAACTGCTTTTTAAG
TTGGCCAGCTATCCGGGCAAAACGTTTACGCGCGACGAGTTGATTGAACAGATCTGGGGCTACGATTATGAAGGAGATGA
ACGAACGGTGGACGTGCATATCAAACGGCTGCGCGAACGGTTTGCCCAACCGGATTCCCCATTTTCCATCCGCACAATTC
GTGGACTCGGCTATCGGCTGGAGGCATGTCAATGA

Protein sequence : 
MARILVVDDDAHIRELVSHFLSLEGFTIHEAANGKEALDVLETVKVDLVIMDIMMPEMDGWELCRELRDYDDVPILMLTA
KGETKQKVKGFELGADDYLVKPFDPLELVARVKALLKRYRITTSQIVQIGHLSLNRKTYECRLGDQEITLPPKEFELLFK
LASYPGKTFTRDELIEQIWGYDYEGDERTVDVHIKRLRERFAQPDSPFSIRTIRGLGYRLEACQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family NC_012469.1.7686381. Protein 2e-38 45
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family NC_012469.1.7685629. Protein 2e-42 45
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family HE999704.1.gene2815. Protein 3e-43 44
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family AE000516.2.gene3505. Protein 8e-39 44
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family AM180355.1.gene1830. Protein 6e-39 43
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family NC_002952.2859905.p0 Protein 2e-40 42
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family NC_002745.1124361.p0 Protein 1e-40 42
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family NC_009782.5559369.p0 Protein 1e-40 42
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family NC_002951.3237708.p0 Protein 1e-40 42
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family NC_003923.1003749.p0 Protein 1e-40 42
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family NC_002758.1121668.p0 Protein 1e-40 42
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family NC_009641.5332272.p0 Protein 1e-40 42
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family NC_013450.8614421.p0 Protein 1e-40 42
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family NC_007793.3914279.p0 Protein 1e-40 42
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family NC_007622.3794472.p0 Protein 2e-40 42
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family AF310956.2.orf0.gene Protein 5e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC61_1696 YP_003252808.1 two component transcriptional regulator, winged helix family VFG1390 Protein 6e-38 41