Gene Information

Name : GYMC61_1548 (GYMC61_1548)
Accession : YP_003252667.1
Strain : Geobacillus sp. Y412MC61
Genome accession: NC_013411
Putative virulence/resistance : Resistance
Product : ATPase P
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1578588 - 1580711 bp
Length : 2124 bp
Strand : +
Note : TIGRFAM: ATPase P; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolas

DNA sequence :
GTGGGGAATGAACAAACATTGGATCGGCTTGAGGCAAAAACATACCGCGTGCAAGGACTGACGTGCACAAACTGCGCAGC
TAAGTTTGAGCGAAACGTGAAATCCTTGCCCGGCGTGAAAGAGGCGAAAGTGAATTTCGGCGCCGCCAAGCTCACCGTTT
GGGGCGAGGCGACGATTGATGAACTTGAACAAGCGGGAGCGTTTGAACAGTTGACCATTCGTGAAGAACGCGAACGCCCG
GCCAGGCGGGAGCCGTTTTGGAAGCGAAAAGAAAATCGAAATGTCTTCGCCTCTGTGGCACTGCTTCTGTTTGGCGTTGC
GGCGGATGCGGCAGACAAGGGGATGCTGGCGGTCGCTATGTATTTGGCGGCGATCGTGATCGGCGGCTACTCACTGTTTT
GGACGGGGCTCCGGAATTTGGTCCGCTGGCAGTTTGACATGACGACGCTAATGACGATCGCCATTTTCGGCGCGGCGGCG
ATCGGGGAATGGCAGGAAGGAGCGGTTGTTGTCATTTTGTTCGCCATCAGTGAAGCGCTCGAGCGCTATTCGATGGACCG
GGCGCGCCGATCGATTGAGTCGCTGATGGAAATGGCGCCGGCGGAGGCGACGATCCGGCGCGGCACGGAGGAAATGACCG
TTCCGGTCGAAGACGTTCGCGTCGGGGATGTCATGATCGTCAAACCAGGGGGAAAAATCGCTTTGGACGGCATTGTCATA
AGCGGCGCCTCGACAGTGAATGAAGCGGCGATCACCGGCGAAAGTCTGCCGGTGGAAAAAGCAGTGGGAGACGCAGTGTT
TGCCGGGACGCTGAATGGAGAAGGATTCCTTGAAGTTGAAGTGACAAAACGGGCGGACGAGACGACATTGGCGAAAATGA
TTGATCTTGTGGAAGAGGCGCAAGCGGAGCGGGCTCCGATGCAAGCGTTCGTCGACCGGTTTGCCCGCTATTATACGCCG
TTTATTATCGTGACCGCGCTTCTGATCGCCATCGTTCCGCCGCTCGTGATGGGCGGGGAGTGGCTTGATTGGATTTACCG
CGGTCTTGCCGTTCTTGTCATCGGCTGCCCGTGCGCGCTCGTCGTCTCCACCCCGGTGGCGATTGTGACGGCCATCGGAA
ACGCGGCTCGGCGCGGCGTGCTCATCAAAGGCGGCGTGCATCTCGAACAAATCGGCCGGCTGCGTGCCGTTGCCTTTGAT
AAAACCGGGACGTTGACGAAAGGGAAACCAGCCGTGACCGATGTCGTCGTGTATGAAGGAACACGTGAGCAGCTGTTGGC
CATCGCCGCCGCCATCGAAAAACGGTCGCAGCACCCTTTGGCTTCTGCCATCGTCCGCAAAGCGGAAGAAGAGGGAGTAC
CGTTTCTTGATGTGGCCGTCGAGTTTCAATCGCTCACCGGCCAAGGAGTGAAGGCGGTGATTGCGGGGAACACGTACTAT
ATCGGCAGCCCCGCCTTGTTCACCAGTTTGATCGGGAAGTTGCCCGATGAAGCGGAAAAGCAAATCTCTGCCTTCCGAGA
CGAAGGAAAAACCGTGATGGCCGTCGGCACGGCCGATCGGCTGTTGGGGCTTATCGCCGCGGCCGATCAACTGCGGCCGT
CCGCACCGGAAACGGTCGCCGCGCTGCGGCGCCTTGGAGTGGCGGAAGTGGTGATGGTGACGGGCGACCACGAGCAAACC
GCACAGGCCATCGGCCGTCAAGCGGGCGTATCCGATATTCGCGCCGAGCTCCTTCCTGAACAGAAGCTGGCGGCGATCCG
CGAGCTGAAAGAACGTTGCGGCATGACCGCCATGGTCGGCGACGGGGTGAATGACGCCCCTGCCTTGGCCGCGGCCGATA
TTGGTGTGGCGATGGGCGGGGCGGGGACGGATACCGCCTTGGAAACGGCCGATGTTGTGCTCATGGCCGACGATTTGCGC
CAGCTGCCGTACACCGTCCACCTTGGGCGCAGAACGCTTGCCGTCATCCGGCAAAACATCGCCGTCGCCTTAGGGCTTAA
AGTGCTGGCACTCGTGGCCGCCGTCCCGGGCTGGCTCACCCTTTGGCTCGCGGTGTTCGCCGATATGGGCGCGACGCTGA
TGGTGACACTCAACAGCATGCGCCTGCTGCGGGTGAAGGAATGA

Protein sequence :
MGNEQTLDRLEAKTYRVQGLTCTNCAAKFERNVKSLPGVKEAKVNFGAAKLTVWGEATIDELEQAGAFEQLTIREERERP
ARREPFWKRKENRNVFASVALLLFGVAADAADKGMLAVAMYLAAIVIGGYSLFWTGLRNLVRWQFDMTTLMTIAIFGAAA
IGEWQEGAVVVILFAISEALERYSMDRARRSIESLMEMAPAEATIRRGTEEMTVPVEDVRVGDVMIVKPGGKIALDGIVI
SGASTVNEAAITGESLPVEKAVGDAVFAGTLNGEGFLEVEVTKRADETTLAKMIDLVEEAQAERAPMQAFVDRFARYYTP
FIIVTALLIAIVPPLVMGGEWLDWIYRGLAVLVIGCPCALVVSTPVAIVTAIGNAARRGVLIKGGVHLEQIGRLRAVAFD
KTGTLTKGKPAVTDVVVYEGTREQLLAIAAAIEKRSQHPLASAIVRKAEEEGVPFLDVAVEFQSLTGQGVKAVIAGNTYY
IGSPALFTSLIGKLPDEAEKQISAFRDEGKTVMAVGTADRLLGLIAAADQLRPSAPETVAALRRLGVAEVVMVTGDHEQT
AQAIGRQAGVSDIRAELLPEQKLAAIRELKERCGMTAMVGDGVNDAPALAAADIGVAMGGAGTDTALETADVVLMADDLR
QLPYTVHLGRRTLAVIRQNIAVALGLKVLALVAAVPGWLTLWLAVFADMGATLMVTLNSMRLLRVKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 0.0 56
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 0.0 55
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 0.0 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC61_1548 YP_003252667.1 ATPase P BAC0298 Protein 4e-113 51
GYMC61_1548 YP_003252667.1 ATPase P BAC0092 Protein 8e-111 44
GYMC61_1548 YP_003252667.1 ATPase P BAC0124 Protein 6e-101 44
GYMC61_1548 YP_003252667.1 ATPase P BAC0461 Protein 2e-97 42