Gene Information

Name : GYMC61_1171 (GYMC61_1171)
Accession : YP_003252307.1
Strain : Geobacillus sp. Y412MC61
Genome accession: NC_013411
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1183309 - 1184001 bp
Length : 693 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0312 lantibiotic ABC transporter ATP-binding protein

DNA sequence :
ATGGAAGAGTATATGTTAGAAACCCGTCATATAAGCAAAGCATTTGGGAAACAACTCGCGGTCGATGATGTATCCATGAA
AGTCAAGAAACATACGATTTATGGATTGCTCGGACCAAATGGAGCCGGAAAATCAACTCTTTTAAAAATGCTGACAGGGC
TGTTGCGTCCGACGAAAGGGGAAATCATGATCAACGGCCATCCTTGGAGCAGAAAAGACCTGAAAGATATCGGCGCACTG
ATCGAATCCCCGGCTCTTTACGGCAATTTAACCGCTCATGAAAACTTGCTTGTTCACGCCAAATTGCTTCATTTGCCCGA
CTCGCGAATCCAAGAAGTTTTGAACATCGTCGGCTTAGAAAATACGGGGAAAAAGAAAGCATCTCAATTCTCCCTTGGCA
TGAAGCAAAGGCTAGGAATTGCCAAAGCTCTTTTAAATGATCCGAAACTGCTCATTCTCGATGAACCAACAAACGGATTG
GATCCATTAGGCATACAGGACTTGCGAAAACTCATTAAATCGTTTGCCGAAAACGGAATCACCGTCATCCTATCCAGCCA
TATTTTGTCAGAAGTCAAACAATTAGCCGATTACATTGGCATTATTCAAAACGGGAAACTCAAATATCAGGGCAAAATCG
ACGAAAGCCAAGATCTTGAAAAACTCTTTATCGATGTAGTGAACGAGCAATGA

Protein sequence :
MEEYMLETRHISKAFGKQLAVDDVSMKVKKHTIYGLLGPNGAGKSTLLKMLTGLLRPTKGEIMINGHPWSRKDLKDIGAL
IESPALYGNLTAHENLLVHAKLLHLPDSRIQEVLNIVGLENTGKKKASQFSLGMKQRLGIAKALLNDPKLLILDEPTNGL
DPLGIQDLRKLIKSFAENGITVILSSHILSEVKQLADYIGIIQNGKLKYQGKIDESQDLEKLFIDVVNEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 1e-49 54
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 3e-42 50
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 3e-42 48
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 3e-42 48
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 3e-42 48
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 2e-42 48
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 2e-42 48
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 1e-42 48
glrA YP_004287007.1 spermidine/putrescine import ATP-binding protein potA Not tested Not named Protein 3e-27 44