Gene Information

Name : Fisuc_0962 (Fisuc_0962)
Accession : YP_003249049.1
Strain : Fibrobacter succinogenes S85
Genome accession: NC_013410
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 1187694 - 1188788 bp
Length : 1095 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: nis:NIS_1416 NAD-dependent epimerase/dehydratase

DNA sequence : 
ATGCTTGACAAAAACGTTATCCTCAATGGAAAGGCCGTTCTTGTTACGGGCGCGGCAGGATTTATCGGTTGCAACCTCTG
CAAGAAGTTGCTTAACGACTACAACTGTTCCGAACTCGTCGGACTCGATTCCATCACCGACTACTATGACGTGAACATCA
AGCACGAGCGTCTCAAGGAGATAGAGACTCTCGCGACATTAACCGGCAAGAAGTGGACATTCGTCAAAGCGAACCTCGCC
GACAAGGCCGCCATCGACAGCCTGTTCGAGAAATACCACTTTGCCGTCGTCGTGAACCTCGCCGCCCAGGCAGGCGTTCG
CTATTCCATCACGAACCCGGATGCCTACATCCAAAGCAACCTCATCGGATTCTACAACATCCTGGAAGCTTGCCGCAGGG
GCGCCGAAAAAGGCGAGGTTGAGCACCTCGTGTACGCGAGCTCCTCCAGCGTGTACGGCAGCAATAAGAAGATCCCGTAC
TCCACCGACGACAAAGTCGATAACCCGGTCTCGCTGTACGCAGCCACCAAGAAGAGCAACGAGCTCATGGCACACGCCTA
CAGCAAGCTCTACAACATCCCGAGCACGGGCCTCCGCTTCTTTACCGTCTACGGCCCCGCCGGCCGCCCGGACATGGCCT
ACTTCGGCTTCACCAACAAGCTCAAAGCCGGCAAGACCATCCAGATTTTCAACTACGGCAAGTGCAAGCGCGACTTCACG
TTCGTTGATGACATTGTCGAAGGCGTCGTGCGCGTGATGCAGCACGCCCCCGAAAAGCAGAATGGCGAAGACGGCCTCCC
CCTCCCGCCATACAAGGTCTACAACATCGGCAACAACCACCCCGAAAACCTGCTCGACTTCGTGACGATCCTCCAAGAAG
AGCTCGTCCGCGCAAAGGTGCTCCCCGCCGATTACGACTTCGAGGCGCACAAGGAACTCGTACCCATGCAGCCTGGCGAC
GTGCCCGTGACCTACGCCGACACAACCGCCCTAGAGCAAGACTTCGGCTTCAAGCCCGCAACACCTCTCCGCGAAGGTCT
AAGAAAGTTTGCGGAATGGTATGCGGAGTGGTATGGGAAAGAGGGTGAAAAGTAG

Protein sequence : 
MLDKNVILNGKAVLVTGAAGFIGCNLCKKLLNDYNCSELVGLDSITDYYDVNIKHERLKEIETLATLTGKKWTFVKANLA
DKAAIDSLFEKYHFAVVVNLAAQAGVRYSITNPDAYIQSNLIGFYNILEACRRGAEKGEVEHLVYASSSSVYGSNKKIPY
STDDKVDNPVSLYAATKKSNELMAHAYSKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNKLKAGKTIQIFNYGKCKRDFT
FVDDIVEGVVRVMQHAPEKQNGEDGLPLPPYKVYNIGNNHPENLLDFVTILQEELVRAKVLPADYDFEAHKELVPMQPGD
VPVTYADTTALEQDFGFKPATPLREGLRKFAEWYAEWYGKEGEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-75 50