Gene Information

Name : Fisuc_0430 (Fisuc_0430)
Accession : YP_003248524.1
Strain : Fibrobacter succinogenes S85
Genome accession: NC_013410
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 496176 - 497792 bp
Length : 1617 bp
Strand : +
Note : TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: ppf:Pput_4798 thiamine biosynthesis protein ThiC

DNA sequence :
ATGTCTGAATCCAACGGCTTTTTCAAGCCTTTTCCGCAGTCTCGCAAGATTTATGTCCCCGGCAAGATTTTCCCGGATTT
GAAAGTCGCCATGCGCGAAATTTCGCTCGACGACCCGAAATGCCCTGTGCTCCCTGTTTACGATACGAGTGGCGCTTATG
GCGACCCCGACAAGACGATTGATGTAAAGAAAGGACTTGAACGCATTCGTGAACCGTGGATCCGCGAACGCTTGGAAAAA
GACGGCGCCCACAAGACTCAGATGCAGTACGCCCGCGAAGGCGTGATTACTCGCGAAATGGAATACGTCGCCATCCGCGA
AAACCAGAAGATGGACGAAATTTTTGGCAGCAACGGTGATGCCATCACGCCGGAATTCGTGCGCAAGGAACTCGCCGAAG
GCCGCGCCATCATCCCTGCCAACGTGAACCACCCGGAATGCGAACCGATGATTATCGGCCGCAACTTCCTCACAAAGATC
AATTCCAACATCGGTAACTCTTCTGTCGCATCTTCCATCGAACAGGAAGTTGAAAAGATGGTCTGGTCTGTGCGCTGGGG
TGCAGATACAGTGATGGACCTTTCGACCGGCAAGGACATTCACGAAACGCGCGAATGGATTTTGCGCAACAGCCCGGTAC
CTATAGGAACCGTGCCGATGTACCAGGCACTTGAAAAGGTGAACGGCATTGCCGACGACCTCACGTGGGAAGTGTTCCGC
GATACGCTTATTGAACAGGCAGAACAGGGCGTCGACTACTTTACGATCCACGCAGGACTTTTGCTCAAGTACATTCCGTT
TGCCTTGGAACGCACGACAGGCATCGTAAGCCGTGGCGGTTCTATCATCGCCCGCTGGTGTATGGTCCACAAGCAAGAGA
ACTTCCTCTACACGCACTTCGACGAAATCTGCGACATTCTCGCCAAATACGACGTTTGCGTTTCTTTGGGCGATGGGCTG
CGTCCGGGTTCCATTGCAGATGCAAACGACATGGCGCAGTTCTCCGAACTCGATACGCTCGGTGAACTCACCGAAATCGC
TTGGAAGAAGGGCGTTCAGGTCATCATTGAAGGTCCGGGTCACGTGCCGATGCACAAGATTCGCGAAAACATGGACCGCC
AGATTGAAATGTGCCACAACGCACCGTTCTACACGCTTGGCCCTCTCACCACGGATATCGCTCCGGGTTACGACCATATC
ACGTCCGCTATCGGTGCTGCAATGATTGGCTGGTTCGGAACCGCCATGCTCTGCTACGTGACGCCGAAGGAACACTTGGG
CCTCCCGGACAAGAACGACGTGCGTGAAGGCGTGGTGACATACAAGCTCGCCGCCCATGCAGCCGACCTTGCCAAGGGCC
ACTTCGCAGCGCACTTCCGCGATGACGCGCTTTCGCGCGCCCGTTTCAGCTTCCGCTGGAACGACCAGTTTGCGCTTTCG
CTCGACCCGGAACGCGCCGTAGAATTCCACGACGAAACGCTCCCGGGCAACAACGCAAAGTCCTCGCACTTCTGCTCGAT
GTGCGGTCCGAAGTTCTGCTCAATGCGCATTTCTAAAGACATTCAGGAATACGTAAAGACTGGCAAGCTTGACCCGAACA
GCGACCCGCTGAAGTAA

Protein sequence :
MSESNGFFKPFPQSRKIYVPGKIFPDLKVAMREISLDDPKCPVLPVYDTSGAYGDPDKTIDVKKGLERIREPWIRERLEK
DGAHKTQMQYAREGVITREMEYVAIRENQKMDEIFGSNGDAITPEFVRKELAEGRAIIPANVNHPECEPMIIGRNFLTKI
NSNIGNSSVASSIEQEVEKMVWSVRWGADTVMDLSTGKDIHETREWILRNSPVPIGTVPMYQALEKVNGIADDLTWEVFR
DTLIEQAEQGVDYFTIHAGLLLKYIPFALERTTGIVSRGGSIIARWCMVHKQENFLYTHFDEICDILAKYDVCVSLGDGL
RPGSIADANDMAQFSELDTLGELTEIAWKKGVQVIIEGPGHVPMHKIRENMDRQIEMCHNAPFYTLGPLTTDIAPGYDHI
TSAIGAAMIGWFGTAMLCYVTPKEHLGLPDKNDVREGVVTYKLAAHAADLAKGHFAAHFRDDALSRARFSFRWNDQFALS
LDPERAVEFHDETLPGNNAKSSHFCSMCGPKFCSMRISKDIQEYVKTGKLDPNSDPLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 64
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 64
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 2e-175 62