|
Name : Fisuc_2639 (Fisuc_2639) Accession : YP_003250704.1 Strain : Fibrobacter succinogenes S85 Genome accession: NC_013410 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3273419 - 3275935 bp Length : 2517 bp Strand : + Note : PFAM: ATPase AAA; Clp ATPase-like; ATPase AAA; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA; KEGG: hypothetical protein ; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC DNA sequence : ATGGCAGATATCAACGGTATTTTTTCAGCTAAGGCAAAAGCAGCGCTGCAGGCGGCACGTATTGCGGCCCGCAATTTAGG GAGCGACTGCGTAACGGTAGAACACCTTTTGTTTGGTCTTGTTCGCGAGGATTCTGGTGTTGCCTCGGAAACGCTCAAGG CTTTGAAGGTCAACCTGACGGAACTCAGTGAGACCATCCAGCGTGCGCTGAGTACGAACGGCGGCCTCATGACGGTCGGT GGCGATTCTCACGGCGGTCTTTTGACATTTACGGGACAGTGCAAGGCGGTGCTTTACAATGCCGCGAAGATTGCCAAGGA AGAAGGCGTCCAGTTCATTGGCCCCGAACACTTGATGCTTGCGATTTTGCAGCAGACCGATTCTCCGGCGGCAGCAACGC TCTCGACGTACAACGTGACGTTTGAAAACTATCAGGAAATGCTGATGCAAATCAAGCGCCAGGCTGACGGACAGCCGATG GATGAAGGTCAGCCCGAAGATGAACCGCGTGAACGTTATACGCAAACTCGTCAGGCGAATCCGCAGTCCCGTTCCAAGAC GCCGATTCTTGAACATTTCGGTCGTGACCTCACGGCGATGGCTCGCGCAGGCAAGCTCGATCCGATTATCGGCCGTGAAG CAGAAATTGAACGCTTGATCCAGATCCTTTGCCGTCGCAAAAAGAACAATCCGGCGCTCATTGGCGAACCGGGCGTGGGC AAGACTGCGATTATCGAAGGCCTTGCTCTCAAGATTGTGCAGCGCAAGATTCCGGACCTCTTGGCGAACAAGCGCGTGGT GACGCTTGACGTTGCCGCCATGGTGGCCGGTACAAAGTATCGTGGCCAGTTCGAAGAACGCGTGAAGGGCCTCATCATGG AACTCCAGCGCGTGGGCAATTCCGTGATTCTCTTTATCGATGAACTCCACACGATTGTGGGCGCAGGCGGCTCCGAAGGC AGCCTTGATGCATCAAACATCTTTAAGCCCGCTCTTGCACGTGGCGAACTCCAGTGCATTGGCGCTACGACTTTTGATGA ATACCGCAAGTACATCGAGAAGGATCCGGCTCTTGAACGTCGCTTCCAGACGATTATTGTGAATCCGCCGACGGTCGAAG ATTCTATCCAGATTCTCGAAGGTCTCCGCCCGAAGTATGAACAACATCACAATGTTCATTACACGCCGGATGCCGTGCGT GCCGCTGTTGAACTTGGTGAACGCTACATCAGCGAACGCTTCTTGCCAGATAAGGCGATTGACGTGCTTGATGAAGCAGG TGCTCGCGTGCGCCTGAATTCCATCAAGATTCCGCAGGACTTGCAGAACATGGAAGACGAGCTTGGTGTCTGCCTCCAGA AAAAGGAAGAAGCGGTAGCCAACCAGGATTACACTTCGGCGGCCCAGCTCCGCGCCCGCGAAGAAGAATTGCAGAACAGC ATTGCCGAACGCAAAAAGCAGCTGCAGAGCGAAGAATCCGAAACGCCGGTTGTCGATGACAACGTTATCCGTGACGTCAT CAGTAAGATGACGGGAATCCCGGTCCGCAGACTCGGTGGCGAAGAAGCGCAAAAGCTCATCCACCTCGGCGATGAAATCA AGCAGCGCGTGATTGGCCAGGATCAGGCCGTTGATGCGATTGTGAAGTCTATCCGCCGTAGTCGTGCAGGCATTCGCAAC AACAAGCGCCCTATGGGAAGCTTCCTCTTCTTGGGACCGACGGGTGTCGGCAAGACGGAACTCGCGAAGGTGCTTTGCAA GGAACTTTTCGGCAGCGAAGATTCGCTTGTGCGTATTGACATGAGCGAATACATGGAAAAGCATAGTGTGAGCCGCTTGA TTGGCGCTCCTCCGGGATACGTGGGCTTTGAAGATGGCGGTGGCCAGCTGAGCGAAAAGGTGCGCAAGCATCCGTATTCT GTGGTGCTGCTTGACGAAATTGAAAAGGCTCATCCGGACATATACAACTTGCTCCTCCAGATTTTGGACGATGGCATTTT GACGGATAGCTATGGCCGCAAGATCAACTTCAAGAATACGATTATCATCATGACGAGTAACGCTGGAGCCCGTGAAGTCC GCCATAGCAGTGGCATGGGCTTTACCAAGATGGGCGAGACGGACGATTACGAACGCATGGAAACCGCCATTCGTGAAGAA GTTAAGCGCGTGTTCTCGCCGGAATTTTTGAACCGCGTGGACGAACAGATTGTGTTCCGCGCCCTCTCGAAGAAGGACCT CGTTTCTGTCGTGGACATCCAGATGGGATTCTTGCAGAAGAACCTTTCCGACCGCGGTATCCTCTTGGAAATGAGCCAGG AAGCAAAGGAATTTGTCGTAAACCACAATTACGATGCTTCGCTGGGGGCACGCCCGATTCGCCGCTCCATCCAGAATCTG GTGGAAGACGAAATCGCCGAAGGGCTTTTGCTCGGGACGATGACGGACTTCTCCACGATTTACGTGGGCGTTGAAAACGG CAAACTCTCGTTCAAGTGCGAGAAGATAAAATCGTAG Protein sequence : MADINGIFSAKAKAALQAARIAARNLGSDCVTVEHLLFGLVREDSGVASETLKALKVNLTELSETIQRALSTNGGLMTVG GDSHGGLLTFTGQCKAVLYNAAKIAKEEGVQFIGPEHLMLAILQQTDSPAAATLSTYNVTFENYQEMLMQIKRQADGQPM DEGQPEDEPRERYTQTRQANPQSRSKTPILEHFGRDLTAMARAGKLDPIIGREAEIERLIQILCRRKKNNPALIGEPGVG KTAIIEGLALKIVQRKIPDLLANKRVVTLDVAAMVAGTKYRGQFEERVKGLIMELQRVGNSVILFIDELHTIVGAGGSEG SLDASNIFKPALARGELQCIGATTFDEYRKYIEKDPALERRFQTIIVNPPTVEDSIQILEGLRPKYEQHHNVHYTPDAVR AAVELGERYISERFLPDKAIDVLDEAGARVRLNSIKIPQDLQNMEDELGVCLQKKEEAVANQDYTSAAQLRAREEELQNS IAERKKQLQSEESETPVVDDNVIRDVISKMTGIPVRRLGGEEAQKLIHLGDEIKQRVIGQDQAVDAIVKSIRRSRAGIRN NKRPMGSFLFLGPTGVGKTELAKVLCKELFGSEDSLVRIDMSEYMEKHSVSRLIGAPPGYVGFEDGGGQLSEKVRKHPYS VVLLDEIEKAHPDIYNLLLQILDDGILTDSYGRKINFKNTIIIMTSNAGAREVRHSSGMGFTKMGETDDYERMETAIREE VKRVFSPEFLNRVDEQIVFRALSKKDLVSVVDIQMGFLQKNLSDRGILLEMSQEAKEFVVNHNYDASLGARPIRRSIQNL VEDEIAEGLLLGTMTDFSTIYVGVENGKLSFKCEKIKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Fisuc_2639 | YP_003250704.1 | ATPase AAA | VFG0080 | Protein | 2e-157 | 51 |
| Fisuc_2639 | YP_003250704.1 | ATPase AAA | VFG0079 | Protein | 0.0 | 49 |
