Gene Information

Name : Fisuc_1731 (Fisuc_1731)
Accession : YP_003249806.1
Strain : Fibrobacter succinogenes S85
Genome accession: NC_013410
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1132
EC number : -
Position : 2118576 - 2120339 bp
Length : 1764 bp
Strand : -
Note : PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: cha:CHAB381_0627 ABC transporter, ATP-binding/permease protein

DNA sequence :
ATGAGTGTTTTCAAAAGACTAACACCTTATATGCAATCGCGAAAAATTTTATATCCGTTTGCACTTTTATTTTCATCATT
GAGTTCCATCGCAGGGATCGCTCCCTTTATATATGTATGGCTCATCGTCCGTGAATTATTCGCTGACACAGGTAATATTT
CATACGACATGGTCAAGCATTACGCATTGATGGCCGTCATTTTCTCCGTCATAAGCATCGTGCTCTATTTTTCAGCGCTC
ATCTGTTCGCACTTAGTCGCCTTCCGCATCGAAGGCAACATCCGCAGAATCACCATGAAAAAATTGCTCAAGCTCCCGCT
TGGCTTTTTCGACAAGAATCCCACCGGACGCATCCGCAAAATCATTGACGACAACGCAGCCGTCACACATACATTCATGG
CGCACGAACTCCCGGATTTAGCAGGGACCATCGTCGTTCCCATCGCCTCGCTCGTATTGTTGTTCATTTTCGATTGGCGT
CTTGGCATCGCCTCCCTCGTCCCAATTGCCTACGCCATCATCACGCTCGGCTCCAAGATGAACAAGAGCAAGGACTTTAT
GCAAAAATACATGAAGTCGCTCGAAGATATGAACACCGAAGCCGTCGAATATGTGCGCGGCATTCCCGTTGTTAAAGTTT
TCCAACAAACTATTTTCTCGTTCAAGAATTTTTATAAGACAATTGATGATTACCATCAGATGGTCACTGCATATTCCAGC
AGCTGGAAGTTCATCATGTGTTCTTACACGACGCTCATCAACGGAGTCGCCCTCATCCTCGTCCCCACAACATTCCTCAT
CGCAACGAGTTCCGGCAACATCGCCGCAACAATCGTCGATTTGATGCTCTATGTTCTCGTAACCCCAGTATTTTCGCAGT
GCGTCATGCGCAGCATGTACTTGAGCCAGGCCGTAAACCAGGCAAAACTTGCCATCGGCAGCATCGAATCGTTGACAGAT
TACCCGGAACTTGCTACACCGACAAACCCGCAAGAAGTCAAGCATTTCGATATTGAATTCAAGAATGTCAAGTTCACCTA
CCCCGGCACAGAAAATGAAGTCCTTCATGACATTTCATTCAAAATAAAGGAAGGCGAAACAGTCGCACTCGTTGGTACAT
CTGGCGGCGGCAAGAGCACCATCGCAAAGCTCGTCCCGAGATTCTTCGACGCCAACGATGGTGAAATTTTAGTCGGCGGC
GCGCCCATCAAGGAAATACCCCAAGAAGTCCTCATGAAAAACACATCATTCGTTTTCCAGAATACTCGACTCTTCAAGAA
GAGTATTTTGGAAAACGTCCGTTACGGAACTCCTGAGGCATCCATTGAAAGCGTCAACAAGGCGCTTGATCTCGCCCAAT
GCCGCGAAATCATTGACCGCCTGCCCGAAGGCATCAACACCGTCATCGGTAGCAAGGGTACATACCTCTCCGGTGGCGAA
CAGCAGCGAATCGTCCTTGCCCGCGCCATTCTCAAGAACGCGCCGATCGTCGTTCTTGACGAAGCGACCGCATTTGCAGA
CCCCGAAAACGAAAGCCTTATCCAGCAAGCACTGCAAACGCTTTCGAAGGGCAAAACAGTCTTGATGATTGCACACAGAC
TCACAAGCATCGTTAACGCCGACCAGATTCTCGTCGTACAAGGCGGCCGCATCATGGAACGCGGCACGCACAAGGAACTC
GTTGAAAAGGGCGGCGTATTCGCCAAGATGTGGCAAGATTATCAGCAGTCCGTCAGCTGGACTATCGGAGGCAAGAATGT
ATAA

Protein sequence :
MSVFKRLTPYMQSRKILYPFALLFSSLSSIAGIAPFIYVWLIVRELFADTGNISYDMVKHYALMAVIFSVISIVLYFSAL
ICSHLVAFRIEGNIRRITMKKLLKLPLGFFDKNPTGRIRKIIDDNAAVTHTFMAHELPDLAGTIVVPIASLVLLFIFDWR
LGIASLVPIAYAIITLGSKMNKSKDFMQKYMKSLEDMNTEAVEYVRGIPVVKVFQQTIFSFKNFYKTIDDYHQMVTAYSS
SWKFIMCSYTTLINGVALILVPTTFLIATSSGNIAATIVDLMLYVLVTPVFSQCVMRSMYLSQAVNQAKLAIGSIESLTD
YPELATPTNPQEVKHFDIEFKNVKFTYPGTENEVLHDISFKIKEGETVALVGTSGGGKSTIAKLVPRFFDANDGEILVGG
APIKEIPQEVLMKNTSFVFQNTRLFKKSILENVRYGTPEASIESVNKALDLAQCREIIDRLPEGINTVIGSKGTYLSGGE
QQRIVLARAILKNAPIVVLDEATAFADPENESLIQQALQTLSKGKTVLMIAHRLTSIVNADQILVVQGGRIMERGTHKEL
VEKGGVFAKMWQDYQQSVSWTIGGKNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1698 YP_003446800.1 multidrug ABC transporter ATPase/permease Not tested The aminoglycoside resistance gene cluster Protein 1e-108 42
ef0101 AAM75304.1 EF0101 Not tested Not named Protein 7e-89 41
EF0583 NP_814348.1 ABC transporter ATP-binding protein/permease Not tested Not named Protein 1e-88 41