Gene Information

Name : GYMC10_6303 (GYMC10_6303)
Accession : YP_003246313.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 7078339 - 7079037 bp
Length : 699 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lwe:lwe2530 ABC transporter, ATP-binding protein

DNA sequence : 
ATGACATCATCCAAGCTGTTGATGGATCAGGTAAGCAAAGAATTCGGTGACGGGGACACCTCAGCTAAAGTACTGGACAA
CATTTCACTGGATATCAAGGGTGGGGAATTTGTCGCGGTGGTCGGACCTTCCGGGTCGGGCAAAAGCACCTTTCTCTCCA
TTGCCGGGGCACTGCTATCCCCTACCCGGGGACGAATATGGATGGGCGATCAAGAGGTCACCCGGCTCCCCGCCAAACAA
ATGAATCAGCTGCGGCTGCGCCATATCGGATTTGTCTTTCAATCTTCCAATCTCATTCCGTATCTTACGGTCCGCGATCA
GCTGCTCTTGATGGCCAAGCTGGCTAACCAGCACGGCCAGGAGCCGCAGCGGCTGGCAGATGATCTGCTTCACCGGCTGG
GCTTGTCGCATCGCAAGTCTCGGTATCCCGAGAGCCTGTCCGGCGGCGAACGGCAGCGGGTTGCCATTGCCCGGGCATGG
ATGAACGATCCGGAGCTCATATTGGCTGACGAGCCGACGGCAAGTCTGGATTCCGAGCGCGGCCGGACGGTCGTTCAAAT
GCTCGCCGATGAGGTGAAGCTGCGCCGGAAAGCTGCCATCATGGTCACGCATGACAAGCGCATGCTGGATCTATGTGACC
GGGTCGTCTATATCGAGGACGGCAAGCTGTCCGAACGGACGCAGCCGATTGTGTTGTAG

Protein sequence : 
MTSSKLLMDQVSKEFGDGDTSAKVLDNISLDIKGGEFVAVVGPSGSGKSTFLSIAGALLSPTRGRIWMGDQEVTRLPAKQ
MNQLRLRHIGFVFQSSNLIPYLTVRDQLLLMAKLANQHGQEPQRLADDLLHRLGLSHRKSRYPESLSGGERQRVAIARAW
MNDPELILADEPTASLDSERGRTVVQMLADEVKLRRKAAIMVTHDKRMLDLCDRVVYIEDGKLSERTQPIVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 8e-47 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 42
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 1e-35 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-36 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-36 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_6303 YP_003246313.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-35 41
GYMC10_6303 YP_003246313.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-29 41