Gene Information

Name : GYMC10_0615 (GYMC10_0615)
Accession : YP_003240725.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 737226 - 738140 bp
Length : 915 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lsp:Bsph_4477 ABC transporter ATP-binding protein

DNA sequence :
GTGACGGAACTCGTCATTCAAACAAAAGGCTTATATAAAATATACAAAAAGCGCGCAGCGGTCGTGGATTTGAATCTGGA
GATCGCCCGCGGCGACATTTACGGCTTCCTCGGCCCGAACGGTGCCGGGAAAACGACGACCATTCGCATGCTGCTCGGAC
TCATTCAACCGACGCGTGGCGCGATTCATTTGTTCGGCAAGGATTTAAAGAGCGAAAAAATGGACATTTTGCGCCGGACC
GGATCGCTTGTGGAATACCCATCCTATTACGGCCACTTGACGGCCGTAGAGAATCTGGAAGCGATCCGCCGGATTACCGG
CGGCCCGAAATCCCGCATCGCGGAAGTGCTGGAGATGGTCTCCTTGACGAAGGAGGCCAAGCGCCCGGTCAAGGGATACT
CGCTAGGGATGAAGCAGCGTCTTGGCATCGCGGCCGCCCTGCTGAACAATCCGGAGCTGCTCATTCTGGATGAGCCGACC
AACGGCCTGGATCCGTCCGGGATACATGAAATCCGGGAGCTGATCAAGAATATGCCGCGCCAATACGGCATTACCGTGTT
GGTATCCAGTCACCTGCTGGGCGAGGTCGAGCAGATGGCGGACAAAGTCGGCATTATTCGCGAAGGAAGAATGGTGTTCC
AGGATACGATCGACAATCTGGTATCCACGGCGTCTAGCGGTTTCCGCTTATCGGTATCCGAGCCTGAGGCAGCGCTTGGA
CTAGCCCTAGACTTAGGCTGCGAAGGCGTCCTGCGGAACCAGATGCTGGAGCTGGAGAGCATGCAGGATGCCAAAATCGC
GCAACTCGTGAAGCGCCTGGTAGAGAACCAGCATGCGGTATACCGGGTGGAAGAGCAGCGGAGGTCGCTGGAGGATATCT
TCATGCAGATCGTAGGGGAGGGAAGCCGGGTATGA

Protein sequence :
MTELVIQTKGLYKIYKKRAAVVDLNLEIARGDIYGFLGPNGAGKTTTIRMLLGLIQPTRGAIHLFGKDLKSEKMDILRRT
GSLVEYPSYYGHLTAVENLEAIRRITGGPKSRIAEVLEMVSLTKEAKRPVKGYSLGMKQRLGIAAALLNNPELLILDEPT
NGLDPSGIHEIRELIKNMPRQYGITVLVSSHLLGEVEQMADKVGIIREGRMVFQDTIDNLVSTASSGFRLSVSEPEAALG
LALDLGCEGVLRNQMLELESMQDAKIAQLVKRLVENQHAVYRVEEQRRSLEDIFMQIVGEGSRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 2e-68 48
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 4e-57 44
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-29 42
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-29 42
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-29 42
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 2e-29 42
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 5e-37 42
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 2e-29 41