Gene Information

Name : GYMC10_6087 (GYMC10_6087)
Accession : YP_003246099.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 6834919 - 6835671 bp
Length : 753 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pjd:Pjdr2_5377 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGGGGAGATTAGACAATAAAGTAGCGATTATTACGGGTGCGGCTGGAGGCATGGGTAAGGCTGACGCTCTTTTGTTTGC
GCAAGAGGGGGCCAAGGTAGCGATTACGGACCTTCAGGAGGATAAAATCAAAGACGTCGTCGCTGAGATTGAAGCGCTCG
GCGGCGAAGCGCTGGGGATCAAGCATAATGTTGCTTCCGAAGAAGATTGGGTCCGCGTCGTGGACGAAACGGTTCAAAAA
TTCGGCAAAATCGACATTCTGGTCAACAATGCCGGTGTCTCCAATGCAACGCCGTTCATGGATTTGACGGTCGAAGGCTG
GGAGAAGACGATGTCGATCAACGTTACGAGCATATTCCTCGGCCAAAAATATGTCATACCGCACATGATCGAAGCCGGCG
GCGGTTCCATCGTCAACATCTCCTCCATTGCCGGCCTGACGGGCGGAAGCGGCGCCGGTCCTTACACGGCAAGCAAAGGC
GCGGTACGCATGCTGACCAAAGCCACGGCCGTTGACTTTGCGAAGCATAACATCCGCTGCAACTCGGTGCACCCGGGCTA
CATCGAAACGCCAATGACCGTGGATCTCTTCAAGGACGAAAAAATGATGCAGTGGTTCCAGTCCCAGACGCCGTTGCCAC
GACTCGGCAAAGCGGAAGATATCGCACGCGGCGTGCTGTTCCTGGCATCCGACGAGTCCTCTTACATTACGGGCGTCGAG
CTGCCGATCGACGGCGGGTATTACGCGAAGTAA

Protein sequence : 
MGRLDNKVAIITGAAGGMGKADALLFAQEGAKVAITDLQEDKIKDVVAEIEALGGEALGIKHNVASEEDWVRVVDETVQK
FGKIDILVNNAGVSNATPFMDLTVEGWEKTMSINVTSIFLGQKYVIPHMIEAGGGSIVNISSIAGLTGGSGAGPYTASKG
AVRMLTKATAVDFAKHNIRCNSVHPGYIETPMTVDLFKDEKMMQWFQSQTPLPRLGKAEDIARGVLFLASDESSYITGVE
LPIDGGYYAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 8e-38 43
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 4e-36 43
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 4e-36 43
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 3e-36 43
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-36 43