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Name : GYMC10_6084 (GYMC10_6084) Accession : YP_003246096.1 Strain : Paenibacillus sp. Y412MC10 Genome accession: NC_013406 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 6830857 - 6832158 bp Length : 1302 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATATGAAATGGATCCGGGAGAGCACGGATCATCAGGAAGAATTGCAGCAAGTGGCTGACCGGAAAGGCATCGC CCTTTCGGTTGCCGAGCTTGTCCGGCTGGATGACCAGCGGCGTACGCTGCTGTTGGCCGTGGAAGCATTGCGTCAGCAGC GTAATGCCATCTCGCAGGAGATCAGTGCCCTGGTGCGGCAAGGCAAACCGGATGAAGCGGAACGGCAAAAACAGCAGGTC AAAACCATCAACGAGGAACTAGACCAGCAGGAAACGTTATACCGGGAGGTTAACGAAGCTTATAACGAGCTGCTTATACT CGTGCCGAATATCGTGTCGCCGGACACGCCTGTGGGAGCCTCGGATGAGGACAACGTGGAGATCAGACGAGTCGGCGAGC TCCCCGTGTTTGATTATGAATTCAGGGACCATGTCACGCTCGGGGAACTGCACCGCATGGTCGACATTCCCCGCGGCGTC AAAACCGCTGGCACGCGCAGCTACTACCTGACAGGCATCGGCGCAATGCTCCATCGGGCCGTTCAGCAGCTGGCGGTGGA TATGCTGGTCGCCAAGGGTTTCGCCCTTATGGATGTACCGTTAACCGTAAGGACGGAGGCCATGCAGAATACCGCCTTCT TCCCGCTCGGTCAGGATCAGGCCTTTCAAATTACGGAGCAAGATAAATGGCTCGTCGGTACCTCGGAGGTGCCGTTGGTA TCGTTCTACAGCGGGGAAATCGTCGATGTAGCGGAGCCGATTCGCCTGGCAGCAGCATCGCTTTGCTTCCGGAGCGAGGT TGGCTCGGGCGGCCGGGACGTCCACGGCCTCTATCGGGTGCACCAGTTCGCGAAGGTGGAACAGGTCGTTCTCTGCGAAG CCAGCACGGAGGCCTCGGAGCAGCTTCTGCAAGAGATTACGGCCAATGCCGAGGAACTACTGCAGAAGCTCGAATTGCCT TACCGGGTCGTTGCCGTCTGTACCGGGGACATGTCGCAGAAAACATACAAACAATACGACATTGAGACATGGATGCCAAG CCGCGGAGCTTATGGGGAGACCCACTCGTCGTCGAATCTGCTCGACTTCCAGGCGCGCCGCTCGAACATCCGCTACCGGG ACGCGGAAGGCAAGCTGCGCTACTGTCACACCCTGAACAATACGGCCGTGGCTTCGCCGCGAATTCTCATCCCGCTGCTG GAGAACCACCAGCAGCCCGACGGTTCGATCCTCATTCCGAAGGCGCTCAGGCCTTACATGAACGGGATGGAGCGGATTGA GCTGCCCAACGGAGCGGAATAA Protein sequence : MLDMKWIRESTDHQEELQQVADRKGIALSVAELVRLDDQRRTLLLAVEALRQQRNAISQEISALVRQGKPDEAERQKQQV KTINEELDQQETLYREVNEAYNELLILVPNIVSPDTPVGASDEDNVEIRRVGELPVFDYEFRDHVTLGELHRMVDIPRGV KTAGTRSYYLTGIGAMLHRAVQQLAVDMLVAKGFALMDVPLTVRTEAMQNTAFFPLGQDQAFQITEQDKWLVGTSEVPLV SFYSGEIVDVAEPIRLAAASLCFRSEVGSGGRDVHGLYRVHQFAKVEQVVLCEASTEASEQLLQEITANAEELLQKLELP YRVVAVCTGDMSQKTYKQYDIETWMPSRGAYGETHSSSNLLDFQARRSNIRYRDAEGKLRYCHTLNNTAVASPRILIPLL ENHQQPDGSILIPKALRPYMNGMERIELPNGAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-67 | 42 |
