Gene Information

Name : GYMC10_5645 (GYMC10_5645)
Accession : YP_003245659.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : 2.4.2.2
Position : 6329564 - 6330865 bp
Length : 1302 bp
Strand : -
Note : KEGG: bpu:BPUM_3585 pyrimidine-nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like

DNA sequence :
ATGAGAATGGTTGATTTAATTGCGAAGAAACGCGACGGCAAGGAACTGACAACAGAAGAGATCAATTTCTTTATCGACGG
ATATACCAAGGGAGATATTCCCGACTATCAGGTGAGCGCCATGAACATGGCGATTTATTTCCAGGACATGTCCGACCGGG
AGCGGGCGGACTTGACGATGGCGATGGTAAACTCCGGCGAAACGATTGATCTGTCCGCAATTGAGGGAATCAAGGTCGAT
AAGCATTCCACCGGGGGCGTAGGGGACACGACGACGCTGGTGCTGGCTCCGCTCGTAGCGGCTCTGGATATTCCGGTAGC
GAAGATGTCGGGACGCGGCCTAGGCCATACCGGAGGAACGATCGACAAGCTGGAATCCATCGAAGGCTTCCATGTGGAGA
TCAGCAAAGACGAATTTGTGAACCTTGTGAATCAACATAAAATCGCCGTCATCGGCCAAACCGGGAACCTCACGCCGGCG
GACAAAAAACTGTACGCGCTCCGGGATGTGACGGCCACCGTCAATTCCATTCCACTGATTGCAAGCTCGATCATGAGCAA
GAAGATTGCCGCCGGCTCGGATGCGATTGTGCTGGACGTTAAAACCGGCGCAGGCGCGTTCATGAAAACGGTGGAGGATG
CCAAGGAACTGGCACACGCCATGGTCAGCATCGGCAACAACGTCGGCCGCAAAACGATGGCGGTCATTTCCGATATGAGC
CAACCGCTTGGGGCCGCGATCGGCAACTCGCTGGAAGTGCAGGAAGCGATCGATGCGCTTCGCGGCGAGGGTCCGAAGGA
TCTGGAAGAGCTGTGCCTGGCGCTGGGCAGACAGATGGTGTACCTGGCCCAGAAGGCGGACTCGCTTGAAGATGCCGAAG
AGAAGCTAAAAGAGGTGATTCGCAACGGCAAGGCACTGGAGAAGTTCAAGGAATTCATCCAGAACCAGGGCGGAGATCCG
TCCGTGGTGGATCATCCGGACCGTCTGCCGAAGGCACAGTATCTCATTGAGCTTCCCGCACAGCAGGACGGCGTTGTCGC
CGAGCTGGTAGCGGATGAGATCGGTACGGCAGCGATGCTGCTCGGGGCCGGCCGCGCGACGAAGGAATCCGAAATTGATT
TGGCGGTAGGCCTGATGCTGAACAAGAAGGTCGGCGATACCGTGAAGAAGGGCGATTCCCTTGTCACGATCCATGCCAAC
CGCGAGAACGTGGACGACGTGAAGCAGAAGCTGTATGAAAGCATTCGAATCGCTGATCATGCGGATGCGCCTGTATTGAT
TTATGACATCGTGACGGAATAA

Protein sequence :
MRMVDLIAKKRDGKELTTEEINFFIDGYTKGDIPDYQVSAMNMAIYFQDMSDRERADLTMAMVNSGETIDLSAIEGIKVD
KHSTGGVGDTTTLVLAPLVAALDIPVAKMSGRGLGHTGGTIDKLESIEGFHVEISKDEFVNLVNQHKIAVIGQTGNLTPA
DKKLYALRDVTATVNSIPLIASSIMSKKIAAGSDAIVLDVKTGAGAFMKTVEDAKELAHAMVSIGNNVGRKTMAVISDMS
QPLGAAIGNSLEVQEAIDALRGEGPKDLEELCLALGRQMVYLAQKADSLEDAEEKLKEVIRNGKALEKFKEFIQNQGGDP
SVVDHPDRLPKAQYLIELPAQQDGVVAELVADEIGTAAMLLGAGRATKESEIDLAVGLMLNKKVGDTVKKGDSLVTIHAN
RENVDDVKQKLYESIRIADHADAPVLIYDIVTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 2e-77 50