Gene Information

Name : GYMC10_5584 (GYMC10_5584)
Accession : YP_003245599.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 6253957 - 6255981 bp
Length : 2025 bp
Strand : -
Note : TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bha:BH

DNA sequence :
ATGCAATGGATACAAAATCAAACGACAACTGGACGCATATCGACGATAGAAAATGGAGCTGATCCGCGTGAGCCGAGGCA
GCCGGGGAAATGGGATATCCGCAGCCTCCTGAGCAATGCGGAGGTAGTGGCTGCGCTTGGCAGCGGTCTGCTGATGCTGG
TGGCCTGGCTGACCAGCCAATGGTCTGAGCCGCTCTCGGTTGTGTTATACGTGATATCCTACGCCGTAGGCGGATGGGTG
AAAGCCAAAGAAGGCGTCGAGACCCTTCTCAAGGAACGCGATCTGGATGTGAACCTGCTGATGATCGCTGCCGCTATGGG
GGCTGCGGCGATCGGATATTGGAACGAAGGCGCGATGCTGATCTTTATCTTTGCCCTCAGCGGAGCGCTTGAGAGTTATA
CGATGGAGAGAAGCCGCAAGGACATCTCGTCCTTGATGGAGCTGCAGCCGGAGACGGCCCTTCGCATCGAGAAGGGGGAA
ATGGTGTCGGTATCCATCAACAAGCTGGAGATCGGCGATCTCATCCTGGTGAAGCCGGGCGAGCTGATTCCGGCAGACGG
CAAAATCTATCGCGGCAGTTCCTCCGTTAACCAGGCCTCCATTACCGGCGAATCCGTGCCGGTCGATAAGTCCGTAGGCG
ATGAAGTGTTCACAGGCACCTTAAACGGGGAAGGGGTCCTGTACATTGAGGTTACCCAATCGGCGGAATCTACTTTGTTC
GCCAAGATCGTCCGGCTGGTGGAAGAAGCGGAGAACGAGGTGCCGGAATCGCAGCGGTTCATCAAGCGGTTCGAATCGAT
TTATGCCCGCGTCGTAGTCATTGCGACCGTGGCGCTGATCGTTCTGGCCACTCCCGTTCTGGGATGGGATTGGGATACTA
CCTTTTATAAAGCGATGGTGTTTCTCGTAGTGGCATCCCCTTGCGCGCTGGTGTCTTCCATTATGCCAGCGATGCTGTCG
GCGATTTCCAATCGCGCCCGAAAGGGTGTCTTGTTCAAGGGCGGCGCCCACATCGAGAATATGGCGCGCACGGCCGTTGT
CGCATTTGATAAGACCGGTACCTTGACGCTCGGCTCACCCGTGGTTACGGATTTTATTGCAGGTGAGGGATGGGATCGGC
ACGAACTGCTTGGCATCAGCGCTTCCATCGAACGGATGTCGAAGCACCCGCTGGCTTTAGCGATTGTCCAATCAGCCGAG
AAAGAGGGAGCACCGCTGCAGCAGGTAGAGAACGGTCAGTCCATCACTGGCTGGGGCATGCAGGCGGAAGTTGCAGGAGT
CACCTGGAAAATAGGCAAAAGCGATATTCTGGATGAAGGGACCGGAGATCCGCGTTCGGGTGCGATTTCCGATCAAGATG
AAAGGTTGGGCGCGGTTCAAGAGAGTCGCCAGCACTGGCTGTCCATTCGGAACACGCTGGAATCCGAAGGCAAAACGGTA
TCCGTTATCCTGAAAGGGGACAGCATCGTGGGCATGATCGCGCTGCAGGACGCGGTCCGTCCTCAGGCAGCCATGGCTGT
GAAGCGGCTCCAGCAGCTGGGCATCAAGGTAGCGATGCTGACGGGGGACCGTAAGGCGACGGCAGAAGTCATCGCCAAGC
AAAGCGGCGTCGACATGGTGTTCTCCGACCTGCTGCCGGAAGATAAGGTTACCCATATTAAGGACCTGCGTGCCCGTTAC
GGCCATGTGGTCATGGTAGGGGATGGCGTGAACGATGCGCCGGCGCTGGCCACGGCAACCGTCGGCATCGGCATGGGCGT
TTCGGGAAGCGGAACCGCGCTGGAGGTAGCGGATGCGGTGCTGATGAACGACAACATCGATGAAATCGCCGGTACCGTCA
AAGTGGCACGCAAGGTTCAACGCATCGTGAAGCAAAACATGATCTTTGCCATTATCGTCATCTTGACACTGATTGCAGCC
AATTTCATCGAAGGCGTAGCGCTGCCGCTCGGGGTCATCGGCCACGAAGGAAGCACGATTCTGGTCATCCTGAACGGGCT
GCGCCTCCTGCGCAGCAGCCGTTAA

Protein sequence :
MQWIQNQTTTGRISTIENGADPREPRQPGKWDIRSLLSNAEVVAALGSGLLMLVAWLTSQWSEPLSVVLYVISYAVGGWV
KAKEGVETLLKERDLDVNLLMIAAAMGAAAIGYWNEGAMLIFIFALSGALESYTMERSRKDISSLMELQPETALRIEKGE
MVSVSINKLEIGDLILVKPGELIPADGKIYRGSSSVNQASITGESVPVDKSVGDEVFTGTLNGEGVLYIEVTQSAESTLF
AKIVRLVEEAENEVPESQRFIKRFESIYARVVVIATVALIVLATPVLGWDWDTTFYKAMVFLVVASPCALVSSIMPAMLS
AISNRARKGVLFKGGAHIENMARTAVVAFDKTGTLTLGSPVVTDFIAGEGWDRHELLGISASIERMSKHPLALAIVQSAE
KEGAPLQQVENGQSITGWGMQAEVAGVTWKIGKSDILDEGTGDPRSGAISDQDERLGAVQESRQHWLSIRNTLESEGKTV
SVILKGDSIVGMIALQDAVRPQAAMAVKRLQQLGIKVAMLTGDRKATAEVIAKQSGVDMVFSDLLPEDKVTHIKDLRARY
GHVVMVGDGVNDAPALATATVGIGMGVSGSGTALEVADAVLMNDNIDEIAGTVKVARKVQRIVKQNMIFAIIVILTLIAA
NFIEGVALPLGVIGHEGSTILVILNGLRLLRSSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 2e-94 42
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 2e-94 42
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 7e-95 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_5584 YP_003245599.1 heavy metal translocating P-type ATPase BAC0092 Protein 2e-126 46