Gene Information

Name : GYMC10_5465 (GYMC10_5465)
Accession : YP_003245481.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1135
EC number : -
Position : 6134800 - 6135816 bp
Length : 1017 bp
Strand : -
Note : PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; KEGG: bbe:BBR47_04610 methionine ABC transporter ATP-binding protein

DNA sequence :
TTGATTGAGCTCAAGCAATTGACGAAGCAGTACGGAAAAGCCGGGTCATTAACAACTGCGTTGTCCGAATTGGATTTGTC
GATTGAAAAAGGAGAAATTTTCGGAGTGATCGGACACTCCGGTGCAGGGAAAAGTACATTGATCCGCTGCATCAATTTAC
TGGAGCGTCCCACCTCGGGCGAGGTGTGGGTGAACGGCAAAAATTTGACGTCGCTCGGCAAGAAGCAGCTTCAGGCGGAG
CGCCGTAGAATCGGCATGATCTTTCAGCACTTTAACCTGCTGTCTTCCGCGACGGTGTACGATAACATTGCGTTTCCGCT
GCGTCTGATCAAGACGCCGAAGGCCGAACTGGAGCGCAAAGTATCCGAGCTGCTGGCTTTGGTCGGCTTGGAGGCGCATC
GCGACAAATACCCGTCCCAGCTGTCAGGGGGCCAGAAGCAGCGGGTAGGCATCGCCAGGGCGCTCGCGAGCGATCCCGAA
GTGCTGCTGTGCGACGAGGCCACTTCGGCCCTTGACCCGCAGACGACGGATTCGATTCTGCGCCTGCTGCTGGACATTAA
CAAAAAGTTTCATCTGACGATCGTACTGATTACCCATGAGATGCATGTAATCCAGAGCATTTGCGACCGGGTCGCCGTTA
TTCATCAGGGCGGCATCGTAGAGCAAGGACCGGTAGCGGAAGTGTTCCTGAAGCCGAAGCATGAAGTGACGCAGGAATTC
ATCCGCCAGGAGATGGACAGCGGCGAAGCGCTGCGGCTGGCTATGCAGGGTCAGGTAAACGGCCCTTCAAGAGCGGTTCA
AATCACGTTCCTAGGGTCGAAAACGTACGAATCGATCCTGTCCCATACCGTTCATGAGACAGGCGTGAATTTTGCGATTC
TGCAGGGTACGATCTCTACGATCAAAGATACGCCGTACGGCCAGCTCATCGTCCGTTTCGAAGGGGAAGAGCGCGCGATT
GAAGATACGATCCGGAAGCTGCTTGAACAAGGACTAGACGTGGAGGTGATTCATTGA

Protein sequence :
MIELKQLTKQYGKAGSLTTALSELDLSIEKGEIFGVIGHSGAGKSTLIRCINLLERPTSGEVWVNGKNLTSLGKKQLQAE
RRRIGMIFQHFNLLSSATVYDNIAFPLRLIKTPKAELERKVSELLALVGLEAHRDKYPSQLSGGQKQRVGIARALASDPE
VLLCDEATSALDPQTTDSILRLLLDINKKFHLTIVLITHEMHVIQSICDRVAVIHQGGIVEQGPVAEVFLKPKHEVTQEF
IRQEMDSGEALRLAMQGQVNGPSRAVQITFLGSKTYESILSHTVHETGVNFAILQGTISTIKDTPYGQLIVRFEGEERAI
EDTIRKLLEQGLDVEVIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 3e-64 51
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 5e-65 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-37 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-36 41