Gene Information

Name : GYMC10_5463 (GYMC10_5463)
Accession : YP_003245479.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : lipoprotein, YaeC family
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1464
EC number : -
Position : 6133223 - 6134065 bp
Length : 843 bp
Strand : -
Note : TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bbe:BBR47_04630 methionine ABC transporter substrate binding protein precursor

DNA sequence :
ATGAAAAAATGGACATTGGCATTGATCAGCTTGACCTTGGTTACGTTGCTGGCTGCATGCGGCAGCAAGCCTGCGGATAA
CGCATCCGAGCCAGGGGGAACAACGGGAGGCGGCGGTCAAGAGACCGTGACCTTGAAAGTAGGGGCTTCGCCATCACCGC
ATGCCAAGATTCTCGAGCATATCAAGCCTGCGCTTGAAAAAGAGGGCGTAAACCTGGAAATCGTAGAATTCACGGATTAT
GTGCTGCCGAATACGCAAGTGGATTCCAAAGAAATCGACGCGAATTTCTTCCAGCACAAGCCTTACCTGGATAACGAAAT
CAAAGAGCGCAAGCTGGACCTGGAGTCCGTGATCGCCGTGCACGTGGAGCCGCTGGGTGCGTACTCCAAAACCATTACAT
CTGTGGATGAGCTGAAGGATGGAGCGGTTGTAGCCATTCCGAATGATCCTTCTAATGCTGGCCGAGCATTGACGCTGCTG
TCCAAGAACGGCGTGATTAAGCTGAACGACGAAAGCAAGCTGGAAGCAACCGCCAAGGATATCGTAGAAAATCCGAAGAA
CCTGGAGTTCAAGGAAGTTGAAGCCGCCATGCTGCCTCGTATGCTGGATGAGCTGGATCTGGCTGTCATCAACACGAACT
ACGCGCTGGAAGCGGGACTGGACCCAACGAAGGACGCGCTCTTCATCGAAGACAAGGACAATCCTTATGCCAACCTGCTG
GTAGCCCGTCCGGACAACAAGGACTCCGACGCCATCCAAAAACTGGCGAAGGCGCTGACTTCCGAGGACGTGAAAACTTT
CATTGAAGAAGAGTACAAAGGTGCCGTCATCCCGGCATTCTAA

Protein sequence :
MKKWTLALISLTLVTLLAACGSKPADNASEPGGTTGGGGQETVTLKVGASPSPHAKILEHIKPALEKEGVNLEIVEFTDY
VLPNTQVDSKEIDANFFQHKPYLDNEIKERKLDLESVIAVHVEPLGAYSKTITSVDELKDGAVVAIPNDPSNAGRALTLL
SKNGVIKLNDESKLEATAKDIVENPKNLEFKEVEAAMLPRMLDELDLAVINTNYALEAGLDPTKDALFIEDKDNPYANLL
VARPDNKDSDAIQKLAKALTSEDVKTFIEEEYKGAVIPAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAAV_0786 YP_003281709.1 ABC transporter substrate-binding protein Not tested SaPIAv Protein 2e-41 43
nlpA AAW51766.1 NlpA Not tested AGI-3 Protein 9e-42 42