Gene Information

Name : GYMC10_5350 (GYMC10_5350)
Accession : YP_003245366.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : capsular exopolysaccharide family
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : 2.7.10.2
Position : 6019928 - 6020617 bp
Length : 690 bp
Strand : -
Note : TIGRFAM: capsular exopolysaccharide family; KEGG: pjd:Pjdr2_1225 capsular exopolysaccharide family

DNA sequence :
ATGGCGAGAAAATACAAAAATCCTCTGGTTACCGTCATTAACCCGAAATCTCCGGCAGCGGAATCGTATCGGGGGCTAAG
GACGAACATTCAATTTTCCGTTCATGACAAACAGGTTAGGGTGATCATGGTTGGCTCGGCTCAAATGAACGAAGGCAAAA
CAACCACAGTTAGCAACTTGGCCGTCGCCTATGCGCATGAAGGCAAAAATGTGCTGTTGATTGAAGCGGATTTGCGCAAA
CCCTCACTGCATCACGTATTCGGCGTTTCGAACGATACCGGATTGACCAATGTCTTGGCCCAGCAGGTAGATGTTGAAGA
CGTCATTCGGCCGACGGCGGTTACGAATCTCTCCGTCATAACTTCCGGCTCTATTCCATACAACCCTTCCGAAATGCTAG
GTTCCCACAACATGCAAATGTTAGTTCACGATCTTAAGCAACGCTACGACATGATTTTGTTTGATACCCCTCCCATATTG
GCAGTGAGCGATGCGCTTATTGTCAGTGCTTTATGCGATGGCGTCGTTTTAGTTGTACTGGGTGGGAAGGTGAAGAAATC
CCAGGTGAGAAAAGCCAAAACTCAACTTGAGCATGTTAAGGCCCATCTTCTTGGGGTAGTGCTTAACAATATAACGATCA
GAGAAAATGAAGCAGAGCAGCTTTATTACGGTAGTAAGTGGTTGAAATGA

Protein sequence :
MARKYKNPLVTVINPKSPAAESYRGLRTNIQFSVHDKQVRVIMVGSAQMNEGKTTTVSNLAVAYAHEGKNVLLIEADLRK
PSLHHVFGVSNDTGLTNVLAQQVDVEDVIRPTAVTNLSVITSGSIPYNPSEMLGSHNMQMLVHDLKQRYDMILFDTPPIL
AVSDALIVSALCDGVVLVVLGGKVKKSQVRKAKTQLEHVKAHLLGVVLNNITIRENEAEQLYYGSKWLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 8e-27 44
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-35 42