Gene Information

Name : GYMC10_5214 (GYMC10_5214)
Accession : YP_003245231.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 5884181 - 5886202 bp
Length : 2022 bp
Strand : -
Note : TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: pjd:Pjdr2_1254 transketolase

DNA sequence :
ATGACAACTGAACATAACCAAACGATCGACAACCTGTCCATCGCAACGATCCGGACATTGGCGATCGACGCGATCGAAAA
AGCCAACTCCGGTCATCCGGGCATGCCGATGGGATCCGCGCCTATGGGCTACCAGCTGTTCGCGAAGACGATGAATCATA
ACCCGGACCAGCCGGCGTGGATTAACCGCGACCGTTTCGTCTTGTCTGCAGGGCATGGCTCCATGCTGCTCTACAGTCTG
CTCCACCTGAGCGGCTATGACTTGTCCATTGAGGACCTGAAACAGTTCCGTCAATGGGGAAGCAAAACGCCGGGGCACCC
GGAATTCGGCCATACGGCCGGCGTTGATGCAACGACAGGTCCGCTCGGACAAGGCGTGGCCATGGCTGTAGGTATGGCAA
TGGCCGAGGCTCACTTGGGCGCGACTTACAATAAAGACGGCTTCAACGTGGTGGATCACTATACGTACGCGATTTGCGGC
GACGGCGACATGATGGAGGGCGTGGCTTCCGAGGCAGCTTCCCTGGCAGGTCACCTGAAGCTTGGCAAATTGATCATGTT
GTACGATTCCAACGATATCTCCCTTGACGGCGAGCTGAACCTGGCCTTCTCCGAGAACGTGGCGAAGCGTTTTGAAGCAT
ATGGCTGGCAAGTGCTGCGCGTAGAAGACGGCAACGATCTGCCTGCGATCGAGAAAGCGATCGAGGAAGCGAAAGGCGAT
TCGAACCGCCCGACGCTGATCGAAGTGAAGACGGTCATCGGTTACGGCAGCCCGAACAAACAAGGTAAAGGCGGCCATGG
CGGTACGCACGGTTCTCCGCTCGGAGCCGACGAAGCGAAGCTGACCAAGGAATTCTATAAATGGGTATATGAAGAGGACT
TCTACGTGCCGGAGGAAGTGCGCGAGCATTTCGGCAAAGTGAAAGAACGCGGCATTGCTGCATATCAAGCGTGGGTGGAT
CAGTTCGCGAAATACAAAGAGGCTTACCCAGAGCTGGCTGCGCAATTCGAGCGCGGTGAATCCGGCGAATTGGCTGAAGG
ATGGGACAAAGACCTTCCGAAATACAGCACGGACGACAAAGCGGTTTCCACTCGCGTGGCTTCCGGTAAAGCGCTGAACG
GTTTGACGGCAGGCGTACCGCAGCTGCTTGGCGGATCGGCTGACCTGGAAAGCTCCACCATGACTCACTTGAACGACCTG
GCATCTTTCACGGCGGAGAGCTATGAAGGCCGCAACGTGTATTATGGCGTTCGCGAATTTGCGATGGCTGGCGCGATGAA
CGGTATCGCTCTCCATGGCGGATTGAAAATTTTCGGCGGTACGTTCTTCGTATTTACCGATTATCTGCGTCCAGCCATTC
GTCTGGCTGCGATCATGAAGCTGCCGGTTACGTATGTGCTTACACATGACAGCATCGCTGTCGGCGAAGACGGCCCTACG
CATGAGCCGATCGAGCAATTGGCTTCCCTGCGCATCATTCCAGGCGTGACCGTTATCCGTCCGGCAGATGCCAATGAGAC
TTCCGCTGCATGGGCTTATGCGGTTGAGAACACGGATCGTCCGGTAGCCTTGGTGCTGACTCGTCAAAATCTGCCGATCC
TCGCAGGCACGGCGGACCATGCGCGTGAAGGCATCAAACGCGGAGCTTATGTTGTTTCCGACGCAAAAGATGGAAACGTG
CAGGCTCAAATCATTGCAACGGGTTCCGAGGTTCAGCTTGCCGTTAAAGCACAAGCGGCATTGGCTGAAGAAGGCATTGC
CGTACGCGTCATCAGCATGCCAAGCTGGGATCTGTTCGACAGCCAGGATCAGGCTTACAAAGATTCCGTGCTGCTTCCTG
ACGTTAAAGCCCGTCTTGCCATTGAAATGGCTCATCCGTTCGGATGGGAGCGTTACGTGGGCGACAAAGGCGACATTCTC
GGCATCAACACGTTTGGCGCTTCCGCTCCTGGCGACCGCGTCATTGCCGAGTACGGATTTACCGTTGAGAACGTGGTTAG
CCGCGTAAAAGGCTTGCTGTAA

Protein sequence :
MTTEHNQTIDNLSIATIRTLAIDAIEKANSGHPGMPMGSAPMGYQLFAKTMNHNPDQPAWINRDRFVLSAGHGSMLLYSL
LHLSGYDLSIEDLKQFRQWGSKTPGHPEFGHTAGVDATTGPLGQGVAMAVGMAMAEAHLGATYNKDGFNVVDHYTYAICG
DGDMMEGVASEAASLAGHLKLGKLIMLYDSNDISLDGELNLAFSENVAKRFEAYGWQVLRVEDGNDLPAIEKAIEEAKGD
SNRPTLIEVKTVIGYGSPNKQGKGGHGGTHGSPLGADEAKLTKEFYKWVYEEDFYVPEEVREHFGKVKERGIAAYQAWVD
QFAKYKEAYPELAAQFERGESGELAEGWDKDLPKYSTDDKAVSTRVASGKALNGLTAGVPQLLGGSADLESSTMTHLNDL
ASFTAESYEGRNVYYGVREFAMAGAMNGIALHGGLKIFGGTFFVFTDYLRPAIRLAAIMKLPVTYVLTHDSIAVGEDGPT
HEPIEQLASLRIIPGVTVIRPADANETSAAWAYAVENTDRPVALVLTRQNLPILAGTADHAREGIKRGAYVVSDAKDGNV
QAQIIATGSEVQLAVKAQAALAEEGIAVRVISMPSWDLFDSQDQAYKDSVLLPDVKARLAIEMAHPFGWERYVGDKGDIL
GINTFGASAPGDRVIAEYGFTVENVVSRVKGLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-136 50
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 3e-135 49