Gene Information

Name : GYMC10_5105 (GYMC10_5105)
Accession : YP_003245124.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Resistance
Product : Cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 5773194 - 5774378 bp
Length : 1185 bp
Strand : -
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: pjd:Pjdr2_4798 cystathionine gamma-synthase

DNA sequence : 
ATGGAGAAGAAACCTTTGAATATAGAGAGCCGGCTGGCACAGATCGGATCGGTGCAGGAACCGGTAACGGGAGCAGTGAA
TTTTCCGATTTATCAGGCTACGGCATACCGCCATCCTAAATTAGGCCAGAGCACGGGGTTTGATTATGCCCGCACCAAGA
ATCCGACACGTTCGGTACTCGAGGATGCTTGCGCCGAGCTGGAATCCGGTGACGCCGGCTTTGCCTGCAGCTCGGGCATG
GCGGCCCTTCAGACGATTTTTGCGCTGTTCGGTCAAGGCGATCACCTGATTGTGTCGCTTGATCTGTACGGAGGGACGTA
TCGGCTGCTGGAGCGGATCATGTCCAAGTTCGGGGTAACGGCAACCTACGTGGATACAAACGACTTGGATGCGCTGGAAG
GATCCAGACGACCGAACACGAAGGCCGTATTTATCGAAACGCCGACGAATCCGCTCATGATGATTACGGATATCGAAGCC
GTCTGTACGTGGGCAAGACGCCATCAATTGATCAGCATCGTGGATAATACGCTGCTAACCCCGTATTTCCAGAGACCCAT
CGAGCTTGGGGCGGATATCGTCATACATAGCGCCACCAAGTATCTGGGAGGGCATAACGATGTGCTGGCAGGCATCATCG
TGACGAAGGGCAAGGAATTATCCGAGGAGATGGCCTTCCTTCATAACTCCATCGGGGCGGTGCTGAGTCCTTCCGATTCC
TACCAGTTAATGAGGGGGATGAAGACACTTGCGCTTCGCATGGACCGGCACGAATCGAATGCAACCGCGGTGGCAACCTT
TTTGACAACCCACCCGGCGATCGGCGAGGTGTATTACCCTGCTCTGCCGGATCATCCGGGGCATGAGATCCAGAATCGCC
AATCCAGCGGCAACACGGGCATCTTCTCCTTCAAGGTGAAGGACGCCCGCTATGTCGAACCGGTGCTGCGGCACATCAAA
CTGATTGCATTCGCGGAAAGCCTCGGAGGCGTCGAGTCCCTGATGACATACCCGGCGGTCCAGACCCATACGGACATCCC
GCTTGAGATTCGGGAAGCGATCGGCGTGGACGACCGCTTGCTTCGGTTCTCGGTCGGCATCGAGCATGCGGATGACCTGA
TCGCGGATTTGGATGCTGCGCTGGGCGCGGCTATGGCAGAAGTGGAAGGGAGCACGGGAGCATGA

Protein sequence : 
MEKKPLNIESRLAQIGSVQEPVTGAVNFPIYQATAYRHPKLGQSTGFDYARTKNPTRSVLEDACAELESGDAGFACSSGM
AALQTIFALFGQGDHLIVSLDLYGGTYRLLERIMSKFGVTATYVDTNDLDALEGSRRPNTKAVFIETPTNPLMMITDIEA
VCTWARRHQLISIVDNTLLTPYFQRPIELGADIVIHSATKYLGGHNDVLAGIIVTKGKELSEEMAFLHNSIGAVLSPSDS
YQLMRGMKTLALRMDRHESNATAVATFLTTHPAIGEVYYPALPDHPGHEIQNRQSSGNTGIFSFKVKDARYVEPVLRHIK
LIAFAESLGGVESLMTYPAVQTHTDIPLEIREAIGVDDRLLRFSVGIEHADDLIADLDAALGAAMAEVEGSTGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-82 46
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-83 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_5105 YP_003245124.1 Cystathionine gamma-synthase BAC0207 Protein 1e-54 41