Gene Information

Name : GYMC10_5102 (GYMC10_5102)
Accession : YP_003245121.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : transposase IS200-family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 5770014 - 5770487 bp
Length : 474 bp
Strand : -
Note : PFAM: transposase IS200-family protein; KEGG: dsy:DSY1392 hypothetical protein

DNA sequence :
ATGGCAACCAAGAGCTACAGCCTAGCTCACACAAAGTGGATGTGCAAATACCACATTGTATTCACCCCGAAGTATAGACG
GAAAGAGATTTATAATCAAGTGAGAAGAGATCTGATTGAAATTTTCAAGCGCTTATGCAAGTACAAAGGTGTAGAGATCA
TAGAAGGTCATATGATGCCGGATCATGTACACATGTTGGTAGCGATCCCACCGAAAATTGCAGTCTCATCGTTCATGGGA
TATCTAAAAGGAAAAAGTTCGCTAATGATCTTTGAGAAGCATGCCCAGCTCAAATATAAATACGGGAATCGAAAATTCTG
GGCAGAAGGATATTATGTGAGTACGGTAGGATTAAATGAAGCAACGGTAAGAAAGTACATTCGTGAACAAGAAGCACATG
ACCAAGCGGTAGATAAGCTGAGTGTAAAAGAGTACGAAGATCCGTTCAGTAGCAACAGGAGCAAGAAGAAATAA

Protein sequence :
MATKSYSLAHTKWMCKYHIVFTPKYRRKEIYNQVRRDLIEIFKRLCKYKGVEIIEGHMMPDHVHMLVAIPPKIAVSSFMG
YLKGKSSLMIFEKHAQLKYKYGNRKFWAEGYYVSTVGLNEATVRKYIREQEAHDQAVDKLSVKEYEDPFSSNRSKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 1e-41 65
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 8e-42 65
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 2e-41 60
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 1e-41 58
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 7e-38 54