Gene Information

Name : GYMC10_5083 (GYMC10_5083)
Accession : YP_003245103.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 5746059 - 5747483 bp
Length : 1425 bp
Strand : -
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: pjd:Pjdr2_4778 glutamine synthetase, type I

DNA sequence :
ATGTCGGTAGAGAAAGTATTGCAAACCATTAAAGAGAACAATATTGAGTGGGTCGATTTTCGTTTTGTAGACTTGTCGGG
ACGGGTGCATCACATTAGCTTGCCGGCTTCAGAAGTAGACGAAGAAACTTTCGTGAACGGGGTAGCGTTTGATGGATCTT
CTATTCCAGGATTCCGCGGCATTGAAGAATCGGATATGGTCATGATGCCTGATCCGGTGTCTTGCTATATTGATCCGTTT
ACAGCACACCCTACACTTAACATTATGAGCAACATCTATACTCCGGAAGGCGATGCTTATGAGCGTGACCCGCGCGGAAT
CGCGGCTCGTGCCGAGCAATACCTTCAAGAAGCCGGCATCGGAACAGCAGCCTTCTTCGCACCGGAATCCGAGTTCTTTC
TGTTCGATGAAGTCCGCTATGAAAGCTCCATGAACAGCTCCAGCTACTTCGTAGACTCCGAGGAAGCCCAGTGGAATACG
AACCGCAAGGAAGAAGGCGGCAACCTGGGTTTCAAAGTAGGGGTTAAGGGCGGATATGTTCCTGTAGCTCCAGTGGATAC
TCAACAGGATATCCGCAGCGAAATGTGCCGTCTCCTCGACGAAGCAGGTCTTCGCGTTGAGCGTCACCACCATGAGGTGG
CAACTGCCGGCCAGGCCGAAATCAATTTCCGTTTCGATACATTGAAGAAAACAGCTGACAATTTGTTGATCTATAAATAT
ATCGTGCATAACACAGCCCGCCAATACGGCAAAACAGCTACGTTCATGCCGAAGCCATTGTTCGGGGATAACGGTAGCGG
CATGCACGTTCACCAATCCATTTTCGACGGCGACACTCCGCTGTTCTACGAAAAAGGCGCTTATGCGAACCTGAGTGAAA
CGGCGCTGCACTACATCGGCGGTATTCTGTACCATGCGCCTGCCTTGATCGCTTTGACGAATCCGAGCACCAACTCCTTC
AAACGTCTGGTACCAGGCTATGAAGCACCGGTTAACCTCGTATTCTCCAAGGGCAACCGTTCTGCCGCAGTACGGATTCC
GGTCGCTGCCGTAACGCCTAAAGGCTGCCGCATCGAGTTCCGTACACCGGACTCCACAGCGAACCCTTACCTTGCATTCT
CTGCTATGCTGATGGCCGGTCTGGACGGGATCAAGCGCAAAATCGATCCTACCGCACTCGGTTACGGGCCATTCGATAAA
AACATTTACGAATTGTCCGACGCCGAGAAGAAGGAAATCCGCAGCGTACCGGGCTCCCTGGACGAGGCATTGGATGCACT
TCAAGCAGACTATGAGTTCTTGACAGAGGGCGGCGTATTCACGCAAGAATTCCTCGAGAACTTCATCGACTTCAAGCGTG
CCGAAGCCAAAGCGGTTAACATCCGCGTTCATCCGCACGAGTACTCCCTGTACTACGATATCTAA

Protein sequence :
MSVEKVLQTIKENNIEWVDFRFVDLSGRVHHISLPASEVDEETFVNGVAFDGSSIPGFRGIEESDMVMMPDPVSCYIDPF
TAHPTLNIMSNIYTPEGDAYERDPRGIAARAEQYLQEAGIGTAAFFAPESEFFLFDEVRYESSMNSSSYFVDSEEAQWNT
NRKEEGGNLGFKVGVKGGYVPVAPVDTQQDIRSEMCRLLDEAGLRVERHHHEVATAGQAEINFRFDTLKKTADNLLIYKY
IVHNTARQYGKTATFMPKPLFGDNGSGMHVHQSIFDGDTPLFYEKGAYANLSETALHYIGGILYHAPALIALTNPSTNSF
KRLVPGYEAPVNLVFSKGNRSAAVRIPVAAVTPKGCRIEFRTPDSTANPYLAFSAMLMAGLDGIKRKIDPTALGYGPFDK
NIYELSDAEKKEIRSVPGSLDEALDALQADYEFLTEGGVFTQEFLENFIDFKRAEAKAVNIRVHPHEYSLYYDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-90 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_5083 YP_003245103.1 glutamine synthetase VFG1399 Protein 2e-119 54