Gene Information

Name : GYMC10_5032 (GYMC10_5032)
Accession : YP_003245052.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 5692387 - 5693160 bp
Length : 774 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mla:Mlab_0378 hypothetical protein

DNA sequence :
ATGTCCGGCTTTACGGTTGAAAATGTCTCGAAGGTCTATGGCGGCGATCTTCCAACAATCTCGCTTCAAAATATAAACCT
GCAGGTGAGGGACGGCGAATTTCTGTGCATCCTCGGGCCGAGCGGCTGCGGAAAAAGCACGCTGCTGGAGCTGCTGGCGG
GATTGCAGCTTCCGACGGAGGGCGACATTTTGCTGGATGGCAAGAAGGTTCAGGGGCCTACGCGGAGCTCTGGGGTCGTA
TTCCAGGATGCATCCCTGTACCCGTGGCGCACCATTTCGCAGAACGTCGGCCTTGGGCTGGAGCTTGCCGGCATGAAAAA
AGCGGAGCGGCAAACGCTCGTTGACAAATATCTGAGCATGGTCGGCTTGGAGGGATTCGGCTCGAAATATCCACATCATT
TATCGGGTGGCATGCGGCAGCGAGCAGGGATCGCAAGGGCGCTCGTGAGCAGTCCCAACATCCTCCTGATGGACGAGCCG
TTCGGCGCGGTGGACCATCTTACCCGGCTTCAGCTTCAGCAGGATCTGCTCCGCATATGGCAGGAGGAGCAGAAAACGGT
GGTGTTTGTGACCCATGACGTATCCGAAGCCGTCTTTCTCGCAGACCGGGTCGTCCTGCTGTCCCCGCGCCCCGGGCGCA
TTCACCATATTTTCGACGTTCCCCATGAGCGTCCGCGCAAGCGGGAGGATGCCAGCCTTCTGAAGATTCAGAACGACATC
TACGCTGCGATTTATGACGTCAAGACGGAAGAGGATTTGGAATTTACGATTTAA

Protein sequence :
MSGFTVENVSKVYGGDLPTISLQNINLQVRDGEFLCILGPSGCGKSTLLELLAGLQLPTEGDILLDGKKVQGPTRSSGVV
FQDASLYPWRTISQNVGLGLELAGMKKAERQTLVDKYLSMVGLEGFGSKYPHHLSGGMRQRAGIARALVSSPNILLMDEP
FGAVDHLTRLQLQQDLLRIWQEEQKTVVFVTHDVSEAVFLADRVVLLSPRPGRIHHIFDVPHERPRKREDASLLKIQNDI
YAAIYDVKTEEDLEFTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-45 46
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-26 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-22 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-22 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-22 41